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ESOPHAGUS - Expression summary

RNA expression
HPA:11.7TPM
GTEx:5.9RPKM
FANTOM5:13.8Tags Per Million

ESOPHAGUS - Annotated protein expression

Pending normal tissue analysis

ESOPHAGUS - HPA RNA-seq

Average TPM

11.7
overview Female, age 70 Sample 1
TPM: 10.1
Cell types%
Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45
overview Male, age 38 Sample 2
TPM: 9.6
Cell types%
Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20
overview Male, age 76 Sample 3
TPM: 15.3
Cell types%
Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM

5.9

GTEx sample id

Sample description

RPKM
Esophagus - Mucosa
RPKM: 5.9
Samples: 286

Max RPKM: 10.1
Min RPKM: 2.8
Std RPKM: 1.3
Median RPKM: 5.8
GTEX-ZYW4-1326-SM-5E45N 60-69 years, male 10.1
GTEX-X585-1226-SM-46MW7 50-59 years, male 9.9
GTEX-TSE9-1226-SM-4DXTM 60-69 years, female 9.6
GTEX-ZYWO-1026-SM-5E45U 40-49 years, female 9.4
GTEX-T5JC-1726-SM-4DM6U 20-29 years, male 9.0
GTEX-ZVE2-1326-SM-5NQ94 50-59 years, male 9.0
GTEX-ZZPT-1426-SM-5N9C5 50-59 years, male 9.0
GTEX-RU72-0726-SM-46MUW 50-59 years, female 8.9
GTEX-R45C-1226-SM-48FEE 60-69 years, female 8.8
GTEX-11TUW-1326-SM-5EQKV 60-69 years, male 8.7
Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million

13.8

FANTOM5 sample id

Sample description

Tags Per Million
Esophagus
Tags Per Million: 13.8
FF:10015-101C6 68,74,75 years, mixed 13.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.