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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
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HBE1
  • TISSUE

  • CELL

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PATHOLOGY ATLAS

GENE/PROTEIN

Antibody validation

Dictionary

Level of antibody staining/expression





High
Medium
Low
Not detected

GENERAL INFORMATION

Gene name

HBE1

Gene description

Hemoglobin, epsilon 1

Protein class

Plasma proteins
Predicted intracellular proteins

Predicted localization

Intracellular

Number of transcripts

3
SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):Mixed
HPA (cell line):Cell line enriched (K-562)
HPA (normal tissue):Tissue enhanced (testis)

Protein evidence

Evidence at protein level

Protein expression
normal tissue

Expression in erythrocytes.

ANTIBODY IHC RELIABILITY

Data reliability
description

Caution, targets protein from more than one gene. Tissue location of RNA and protein might differ and correlation is complex.

Reliability score

Approved based on 1 antibody.
HPA043234
SHOW MORE

PROGNOSTIC SUMMARY

Gene product is not prognostic.
Show all

RNA EXPRESSION OVERVIEW

TCGA dataset
RNA cancer category: Mixed

PROTEIN EXPRESSION

Colorectal cancer
Breast cancer
Prostate cancer
Lung cancer

STAINING SUMMARY

HPA043234

Cancer

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 
 

Cancer

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

Hepatocellular carcinomas along with occasional cases of renal cancers showed moderate to strong cytoplasmic positivity in a granular pattern. Remaining cancer tissues were negative.

GENE INFORMATION

Gene name

HBE1 (HGNC Symbol)

Synonyms

HBE

Description

Hemoglobin, epsilon 1 (HGNC Symbol)

Entrez gene summary

The epsilon globin gene (HBE) is normally expressed in the embryonic yolk sac: two epsilon chains together with two zeta chains (an alpha-like globin) constitute the embryonic hemoglobin Hb Gower I; two epsilon chains together with two alpha chains form the embryonic Hb Gower II. Both of these embryonic hemoglobins are normally supplanted by fetal, and later, adult hemoglobin. The five beta-like globin genes are found within a 45 kb cluster on chromosome 11 in the following order: 5'-epsilon - G-gamma - A-gamma - delta - beta-3' [provided by RefSeq, Jul 2008]

Chromosome

11

Cytoband

p15.4

Chromosome location (bp)

5268345 - 5505617

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000213931 (version 83.38)

Entrez gene

3046

UniProt

P02100 (UniProt - Evidence at protein level)

neXtProt

NX_P02100

Antibodypedia

HBE1 antibodies

PROTEIN BROWSER

HBE1-001
HBE1-002
HBE1-201

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

HBE1-001
ENSP00000369586
ENST00000380237
P02100 [Direct mapping]
Hemoglobin subunit epsilon
D9YZU7 [Target identity:100%; Query identity:100%]
Hemoglobin, epsilon 1
Show all
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
Plasma proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000122 [negative regulation of transcription from RNA polymerase II promoter]
GO:0005344 [oxygen transporter activity]
GO:0005506 [iron ion binding]
GO:0005829 [cytosol]
GO:0005833 [hemoglobin complex]
GO:0007596 [blood coagulation]
GO:0015671 [oxygen transport]
GO:0019825 [oxygen binding]
GO:0020037 [heme binding]
GO:0031721 [hemoglobin alpha binding]
GO:0051291 [protein heterooligomerization]
GO:0072562 [blood microparticle]
Show all
147 aa
16.2 kDa
No 0
HBE1-002
ENSP00000380104
ENST00000396895
A8MUF7 [Direct mapping]
Hemoglobin subunit epsilon
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005344 [oxygen transporter activity]
GO:0005506 [iron ion binding]
GO:0005833 [hemoglobin complex]
GO:0015671 [oxygen transport]
GO:0019825 [oxygen binding]
GO:0020037 [heme binding]
Show all
87 aa
9.5 kDa
No 0
HBE1-201
ENSP00000292896
ENST00000292896
P02100 [Direct mapping]
Hemoglobin subunit epsilon
D9YZU7 [Target identity:100%; Query identity:100%]
Hemoglobin, epsilon 1
Show all
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
Plasma proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005344 [oxygen transporter activity]
GO:0005506 [iron ion binding]
GO:0005829 [cytosol]
GO:0007596 [blood coagulation]
GO:0015671 [oxygen transport]
GO:0019825 [oxygen binding]
GO:0020037 [heme binding]
GO:0072562 [blood microparticle]
Show all
147 aa
16.2 kDa
No 0

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