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TM6SF2

COLON - Expression summary

RNA expression
HPA:2.0TPM
GTEx:1.7RPKM
FANTOM5:122.6Tags Per Million

COLON - Annotated protein expression
 

Antibody staining

Antibody HPA066026

  

Endothelial cells

 Not detected  

Glandular cells

 Not detected  

Peripheral nerve/ganglion

 Not detected  
 
 
 

COLON - HPA RNA-seq

Average TPM

2.0
overview Male, age 54 Sample 1
TPM: 4.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 3.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 1.3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 3.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 1.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 0.7
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 1
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 2.5
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 0.4
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 2.7
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 2.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 1.6
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 1.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

1.7

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 0.4
Samples: 149

Max RPKM: 11.8
Min RPKM: 0.0
Std RPKM: 0.9
Median RPKM: 0.2
GTEX-YEC3-2026-SM-4WWFL 50-59 years, male 11.8
GTEX-V955-1726-SM-4JBHF 60-69 years, male 1.3
GTEX-Y5LM-1426-SM-5RQJL 40-49 years, female 1.1
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 0.8
GTEX-11EMC-1426-SM-5N9E4 60-69 years, female 0.7
GTEX-WFON-1326-SM-4LVMN 40-49 years, male 0.7
GTEX-ZAB4-2426-SM-5HL8A 40-49 years, male 0.7
GTEX-ZDTS-2726-SM-5L3E2 60-69 years, male 0.7
GTEX-111CU-1226-SM-5EGIN 50-59 years, male 0.6
GTEX-11ZTS-1526-SM-5N9G7 60-69 years, female 0.6
Show all
Colon - Transverse
RPKM: 2.7
Samples: 196

Max RPKM: 20.1
Min RPKM: 0.0
Std RPKM: 3.2
Median RPKM: 1.5
GTEX-14E6E-1526-SM-5RQIG 30-39 years, male 20.1
GTEX-1122O-1526-SM-5N9CL 60-69 years, female 18.6
GTEX-UJHI-1126-SM-4IHLN 50-59 years, female 15.7
GTEX-Y5LM-1526-SM-4VDTA 40-49 years, female 14.8
GTEX-R55G-1226-SM-48FDC 40-49 years, female 11.5
GTEX-P4PP-1426-SM-3NM9L 30-39 years, female 10.5
GTEX-ZV7C-1526-SM-5NQ72 50-59 years, male 10.5
GTEX-11P7K-1526-SM-5EGI7 30-39 years, male 9.0
GTEX-UPIC-1726-SM-4IHKG 20-29 years, female 8.9
GTEX-ZT9W-1826-SM-51MQX 50-59 years, male 8.3
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

122.6

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 122.6
FF:10014-101C5 62,83,84 years, mixed 122.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.