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ALG3

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:18.9TPM
GTEx:14.4RPKM
FANTOM5:35.2Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Medium
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA045103

  

Endothelial cells

 Not detected  

Glandular cells

 Medium  

Peripheral nerve/ganglion

 Not detected  
 
 
 

COLON - HPA RNA-seq

Average TPM

18.9
overview Male, age 54 Sample 1
TPM: 17.5
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 13.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 13.3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 15.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 13
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 27.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 23.1
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 22.2
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 15.7
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 25.7
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 23.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 20.9
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 14.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

14.4

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 12.4
Samples: 149

Max RPKM: 30.4
Min RPKM: 6.5
Std RPKM: 3.2
Median RPKM: 11.9
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 30.4
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 24.3
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 21.4
GTEX-WQUQ-2626-SM-4MVNP 60-69 years, male 20.7
GTEX-131XE-1026-SM-5EGKE 50-59 years, male 20.3
GTEX-ZTTD-2626-SM-57WEX 50-59 years, male 18.8
GTEX-12WSL-1826-SM-5LZW9 50-59 years, male 17.7
GTEX-11I78-1326-SM-5PNY9 50-59 years, female 17.3
GTEX-YJ8A-1726-SM-5P9IQ 20-29 years, male 17.3
GTEX-146FH-2426-SM-5Q5EW 50-59 years, female 17.1
Show all
Colon - Transverse
RPKM: 15.9
Samples: 196

Max RPKM: 33.1
Min RPKM: 7.0
Std RPKM: 5.0
Median RPKM: 15.1
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 33.1
GTEX-XV7Q-2126-SM-4BRVX 40-49 years, female 32.6
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 31.2
GTEX-QDVN-1326-SM-48TZ3 50-59 years, male 29.2
GTEX-PWOO-1326-SM-48TCJ 40-49 years, female 29.1
GTEX-13S86-1626-SM-5Q5C5 40-49 years, male 28.2
GTEX-U4B1-1126-SM-4DXV3 40-49 years, male 28.0
GTEX-R53T-1326-SM-48FCQ 50-59 years, female 27.1
GTEX-146FQ-1926-SM-5NQBY 30-39 years, male 26.2
GTEX-YF7O-1726-SM-5IFJ9 50-59 years, male 25.5
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

35.2

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 35.2
FF:10014-101C5 62,83,84 years, mixed 35.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.