Expression of SPATA31D1 in cancer - Summary - The Human Protein Atlas

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SPATA31D1

TISSUE

CELL

PATHOLOGY

PATHOLOGY ATLAS

GENE/PROTEIN

Antibody validation

Dictionary


Level of antibody staining/expression
	High Medium Low Not detected

GENERAL INFORMATION
Gene name	SPATA31D1
Gene description	SPATA31 subfamily D, member 1
Protein class	Predicted membrane proteins
Predicted localization	Membrane
Number of transcripts	1
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HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):	Not detected
HPA (cell line):	Not detected
HPA (normal tissue):	Tissue enriched (testis)

Protein evidence

Evidence at transcript level

Protein expression
normal tissue

Estimation of protein expression could not be performed. View primary data.

ANTIBODY IHC RELIABILITY
Data reliability description	RNA-based expert annotation gave inconclusive results. Pending external verification.
Reliability score	Uncertain based on 1 antibody. HPA047897
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PROGNOSTIC SUMMARY
Gene product is not prognostic.
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RNA EXPRESSION OVERVIEW
TCGA dataset RNA cancer category: Not detected

PROTEIN EXPRESSION

Colorectal cancer

Prostate cancer

STAINING SUMMARY

HPA047897

GENE INFORMATION
Gene name	SPATA31D1 (HGNC Symbol)
Synonyms	FAM75D1, FLJ46321
Description	SPATA31 subfamily D, member 1 (HGNC Symbol)
Entrez gene summary
Chromosome	9
Cytoband	q21.32
Chromosome location (bp)	81988772 - 81995256
Protein evidence	Evidence at transcript level (all genes)
Ensembl	ENSG00000214929 (version 83.38)
Entrez gene	389763
UniProt	Q6ZQQ2 (UniProt - Evidence at transcript level)
neXtProt	NX_Q6ZQQ2
Antibodypedia	SPATA31D1 antibodies

PROTEIN BROWSER

SPATA31D1-001

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
SPATA31D1-001 ENSP00000341988 ENST00000344803	Q6ZQQ2 [Direct mapping] Spermatogenesis-associated protein 31D1 Show all	Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins # TM segments-based 1TM proteins predicted by MDM Show all	GO:0007283 [spermatogenesis] GO:0016021 [integral component of membrane] GO:0030154 [cell differentiation] Show all	1576 aa 175.6 kDa	No	1

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.