Expression of ZNF407 in cancer - Summary - The Human Protein Atlas

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ZNF407

TISSUE

CELL

PATHOLOGY

PATHOLOGY ATLAS

GENE/PROTEIN

Antibody validation

Dictionary


Level of antibody staining/expression
	High Medium Low Not detected

GENERAL INFORMATION
Gene name	ZNF407
Gene description	Zinc finger protein 407
Protein class	Predicted intracellular proteins Transcription factors
Predicted localization	Intracellular
Number of transcripts	6
	SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):	Expressed in all
HPA (cell line):	Mixed
HPA (normal tissue):	Mixed

Protein evidence

Evidence at protein level

Protein expression
normal tissue

Cytoplasmic and cytoplasmic expression in most tissues.

ANTIBODY IHC RELIABILITY
Data reliability description	Pending external verification.
Reliability score	Uncertain based on 1 antibody. HPA028255
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PROGNOSTIC SUMMARY
Prognostic marker in renal cancer (favourable).
Renal cancer p<0.001 Show all

RNA EXPRESSION OVERVIEW
TCGA dataset RNA cancer category: Expressed in all

PROTEIN EXPRESSION

Colorectal cancer

Prostate cancer

STAINING SUMMARY

HPA028255

GENE INFORMATION
Gene name	ZNF407 (HGNC Symbol)
Synonyms	FLJ13839, FLJ20307, KIAA1703
Description	Zinc finger protein 407 (HGNC Symbol)
Entrez gene summary	This gene encodes a zinc finger protein whose exact function is not known. It may be involved in transcriptional regulation. Several alternatively spliced transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Sep 2009]
Chromosome	18
Cytoband	q22.3
Chromosome location (bp)	74597870 - 75065671
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000215421 (version 83.38)
Entrez gene	55628
UniProt	Q9C0G0 (UniProt - Evidence at protein level)
neXtProt	NX_Q9C0G0
Antibodypedia	ZNF407 antibodies

PROTEIN BROWSER

ZNF407-001	ZNF407-002	ZNF407-004	ZNF407-005	ZNF407-006	ZNF407-201

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
ZNF407-001 ENSP00000299687 ENST00000299687	Q9C0G0 [Direct mapping] Zinc finger protein 407 Show all	Predicted intracellular proteins Transcription factors Zinc-coordinating DNA-binding domains Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all	GO:0003676 [nucleic acid binding] GO:0003677 [DNA binding] GO:0005634 [nucleus] GO:0006351 [transcription, DNA-templated] GO:0006355 [regulation of transcription, DNA-templated] GO:0008270 [zinc ion binding] GO:0046872 [metal ion binding] Show all	2248 aa 247.4 kDa	No	0
ZNF407-002 ENSP00000462348 ENST00000582337	Q9C0G0 [Direct mapping] Zinc finger protein 407 Show all	Predicted intracellular proteins Transcription factors Zinc-coordinating DNA-binding domains Protein evidence (Ezkurdia et al 2014) Show all	GO:0003676 [nucleic acid binding] GO:0003677 [DNA binding] GO:0005634 [nucleus] GO:0006351 [transcription, DNA-templated] GO:0006355 [regulation of transcription, DNA-templated] GO:0008270 [zinc ion binding] GO:0046872 [metal ion binding] Show all	1660 aa 184.1 kDa	No	0
ZNF407-004 ENSP00000481798 ENST00000584235	A0A087WYH1 [Direct mapping] Zinc finger protein 407 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0003676 [nucleic acid binding] GO:0046872 [metal ion binding] Show all	129 aa 15.2 kDa	No	0
ZNF407-005 ENSP00000479246 ENST00000581829	A0A087WV78 [Direct mapping] Zinc finger protein 407 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0003676 [nucleic acid binding] GO:0046872 [metal ion binding] Show all	137 aa 15.9 kDa	No	0
ZNF407-006 ENSP00000463270 ENST00000577538	Q9C0G0 [Direct mapping] Zinc finger protein 407 Show all	Predicted intracellular proteins Transcription factors Zinc-coordinating DNA-binding domains Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all	GO:0003676 [nucleic acid binding] GO:0003677 [DNA binding] GO:0005634 [nucleus] GO:0006351 [transcription, DNA-templated] GO:0006355 [regulation of transcription, DNA-templated] GO:0008270 [zinc ion binding] GO:0046872 [metal ion binding] Show all	1815 aa 202.4 kDa	No	0
ZNF407-201 ENSP00000310359 ENST00000309902	Q9C0G0 [Direct mapping] Zinc finger protein 407 Show all	Predicted intracellular proteins Transcription factors Zinc-coordinating DNA-binding domains Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all	GO:0003676 [nucleic acid binding] GO:0003677 [DNA binding] GO:0005634 [nucleus] GO:0006351 [transcription, DNA-templated] GO:0006355 [regulation of transcription, DNA-templated] GO:0008270 [zinc ion binding] GO:0046872 [metal ion binding] Show all	1660 aa 184.1 kDa	No	0

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
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