Expression of CT47A9 in cancer - Summary - The Human Protein Atlas

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CT47A9

TISSUE

CELL

PATHOLOGY

PATHOLOGY ATLAS

GENE/PROTEIN

Antibody validation

Dictionary


Level of antibody staining/expression
	High Medium Low Not detected

GENERAL INFORMATION
Gene name	CT47A9
Gene description	Cancer/testis antigen family 47, member A9
Protein class	Predicted intracellular proteins
Predicted localization	Intracellular
Number of transcripts	1
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HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):	Not detected
HPA (cell line):	Not detected
HPA (normal tissue):	Tissue enriched (testis)

Protein evidence

Evidence at transcript level

Protein expression
normal tissue

Expression in seminiferus ducts in testis.

ANTIBODY IHC RELIABILITY
Data reliability description	Caution, targets protein from more than one gene. Presumed off target binding observed and disregarded.
Reliability score	Approved based on 1 antibody. HPA042483
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PROGNOSTIC SUMMARY
Gene product is not prognostic.
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RNA EXPRESSION OVERVIEW
TCGA dataset RNA cancer category: Not detected

PROTEIN EXPRESSION

Colorectal cancer

Prostate cancer

STAINING SUMMARY

HPA042483

GENE INFORMATION
Gene name	CT47A9 (HGNC Symbol)
Synonyms	CT47.9
Description	Cancer/testis antigen family 47, member A9 (HGNC Symbol)
Entrez gene summary	This locus represents a member of the cancer/testis gene family 47. This family, also known as CT47, is comprised of 13 nearly identical loci clustered at Xq24. [provided by RefSeq, Sep 2010]
Chromosome	X
Cytoband	q24
Chromosome location (bp)	120943561 - 120946883
Protein evidence	Evidence at transcript level (all genes)
Ensembl	ENSG00000226600 (version 83.38)
Entrez gene	728042
UniProt	Q5JQC4 (UniProt - Evidence at transcript level)
neXtProt	NX_Q5JQC4
Antibodypedia	CT47A9 antibodies

PROTEIN BROWSER

CT47A9-001

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
CT47A9-001 ENSP00000408204 ENST00000417256	Q5JQC4 [Direct mapping] Cancer/testis antigen 47A Show all	Predicted intracellular proteins Show all		288 aa 30.1 kDa	No	0

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.