Expression of TMEM238 in cancer - Summary - The Human Protein Atlas

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TMEM238

TISSUE

CELL

PATHOLOGY

GENERAL INFORMATION
Gene name	TMEM238
Gene description	Transmembrane protein 238
Protein class	Predicted membrane proteins
Predicted localization	Membrane
Number of transcripts	1
	SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):	Expressed in all
HPA (cell line):	Cell line enhanced (A-431, HaCaT)
HPA (normal tissue):	Tissue enhanced (small intestine, stomach)

Protein evidence

Evidence at protein level

ANTIBODY IHC RELIABILITY
Reliability score	Pending cancer tissue analysis.

PROGNOSTIC SUMMARY
Prognostic marker in renal cancer (favourable).
Renal cancer p<0.001 Show all

RNA EXPRESSION OVERVIEW
TCGA dataset RNA cancer category: Expressed in all

PROTEIN EXPRESSION
Pending cancer tissue analysis
STAINING SUMMARY

GENE INFORMATION
Gene name	TMEM238
Synonyms
Description	Transmembrane protein 238 (HGNC Symbol)
Entrez gene summary
Chromosome	19
Cytoband	q13.42
Chromosome location (bp)	55379245 - 55384598
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000233493 (version 83.38)
Entrez gene	388564
UniProt	C9JI98 (UniProt - Evidence at protein level)
neXtProt	NX_C9JI98
Antibodypedia	TMEM238 antibodies

PROTEIN BROWSER

TMEM238-001

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
TMEM238-001 ENSP00000416154 ENST00000444469	C9JI98 [Direct mapping] Transmembrane protein 238 Show all	Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins # TM segments-based 2TM proteins predicted by MDM Protein evidence (Ezkurdia et al 2014) Show all	GO:0016021 [integral component of membrane] Show all	176 aa 18 kDa	Yes	2

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.