Expression of CT47B1 in cancer - Summary - The Human Protein Atlas

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CT47B1

TISSUE

CELL

PATHOLOGY

PATHOLOGY ATLAS

GENE/PROTEIN

Antibody validation

Dictionary


Level of antibody staining/expression
	High Medium Low Not detected

GENERAL INFORMATION
Gene name	CT47B1
Gene description	Cancer/testis antigen family 47, member B1
Protein class	Predicted intracellular proteins
Predicted localization	Intracellular
Number of transcripts	1
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HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):	Not detected
HPA (cell line):	Not detected
HPA (normal tissue):	Tissue enriched (testis)

Protein evidence

Evidence at protein level

Protein expression
normal tissue

Expression in seminiferus ducts in testis.

ANTIBODY IHC RELIABILITY
Data reliability description	Caution, targets protein from more than one gene. Presumed off target binding observed and disregarded.
Reliability score	Approved based on 1 antibody. HPA042483
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PROGNOSTIC SUMMARY
Gene product is not prognostic.
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RNA EXPRESSION OVERVIEW
TCGA dataset RNA cancer category: Not detected

PROTEIN EXPRESSION

Colorectal cancer

Prostate cancer

STAINING SUMMARY

HPA042483

GENE INFORMATION
Gene name	CT47B1 (HGNC Symbol)
Synonyms	CT47.13
Description	Cancer/testis antigen family 47, member B1 (HGNC Symbol)
Entrez gene summary
Chromosome	X
Cytoband	q24
Chromosome location (bp)	120872603 - 120875929
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000236446 (version 83.38)
Entrez gene	643311
UniProt	P0C2W7 (UniProt - Predicted)
neXtProt	NX_P0C2W7
Antibodypedia	CT47B1 antibodies

PROTEIN BROWSER

CT47B1-001

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
CT47B1-001 ENSP00000360360 ENST00000371311	P0C2W7 [Direct mapping] Cancer/testis antigen 47B Show all	THUMBUP predicted membrane proteins Predicted intracellular proteins Protein evidence (Kim et al 2014) Show all		299 aa 31.3 kDa	No	0

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.