Tissue expression of CKMT1B - Staining in esophagus

ESOPHAGUS - Expression summary

Protein expression

RNA expression

HPA:	42.0	TPM
GTEx:	10.5	RPKM

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:

High

Antibody staining	Antibody HPA043491
Squamous epithelial cells	High

ESOPHAGUS - HPA RNA-seq

Average TPM	42.0

Female, age 70

Sample 1
TPM: 44.7

Cell types%

Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45

Male, age 38

Sample 2
TPM: 34

Cell types%

Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20

Male, age 76

Sample 3
TPM: 47.3

Cell types%

Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM	10.5

GTEx sample id

Sample description

RPKM

Esophagus - Mucosa
RPKM: 10.5

Samples: 286

Max RPKM: 27.1
Min RPKM: 1.9
Std RPKM: 4.0
Median RPKM: 10.2

GTEX-12KS4-0926-SM-5BC5S

30-39 years, male

27.1

GTEX-YEC3-2526-SM-4YCDN

50-59 years, male

23.7

GTEX-ZXES-1126-SM-5GZXN

30-39 years, female

22.7

GTEX-13PVQ-1726-SM-5IFF3

50-59 years, male

21.4

GTEX-11DYG-1326-SM-5N9DO

60-69 years, male

21.0

GTEX-13W3W-1626-SM-5LU35

60-69 years, female

21.0

GTEX-131XF-0826-SM-5GICG

60-69 years, male

20.9

GTEX-ZYY3-1526-SM-5SIA9

60-69 years, female

20.2

GTEX-ZVT2-1326-SM-5E45H

50-59 years, female

20.1

GTEX-P78B-1026-SM-3NMC4

40-49 years, female

19.9

Show all

ESOPHAGUS - FANTOM5 CAGE
No Fantom CAGE analysis found for this gene / tissue