Expression of BHMG1 in cancer - Summary - The Human Protein Atlas

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BHMG1

TISSUE

CELL

PATHOLOGY

PATHOLOGY ATLAS

GENE/PROTEIN

Antibody validation

Dictionary


Level of antibody staining/expression
	High Medium Low Not detected

GENERAL INFORMATION
Gene name	BHMG1
Gene description	Basic helix-loop-helix and HMG box domain containing 1
Protein class	Predicted intracellular proteins
Predicted localization	Intracellular
Number of transcripts	1
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HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):	Tissue enriched (testis cancer)
HPA (cell line):	Cell line enhanced (Daudi, K-562)
HPA (normal tissue):	Tissue enriched (testis)

Protein evidence

Evidence at transcript level

Protein expression
normal tissue

Estimation of protein expression could not be performed. View primary data.

ANTIBODY IHC RELIABILITY
Data reliability description	RNA-based expert annotation gave inconclusive results. Pending external verification.
Reliability score	Uncertain based on 1 antibody. HPA049521
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PROGNOSTIC SUMMARY
Gene product is not prognostic.
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RNA EXPRESSION OVERVIEW
TCGA dataset RNA cancer category: Tissue enriched (testis cancer)

PROTEIN EXPRESSION

Colorectal cancer

Prostate cancer

STAINING SUMMARY

HPA049521

GENE INFORMATION
Gene name	BHMG1 (HGNC Symbol)
Synonyms	HMGDC
Description	Basic helix-loop-helix and HMG box domain containing 1 (HGNC Symbol)
Entrez gene summary
Chromosome	19
Cytoband	q13.32
Chromosome location (bp)	45733251 - 45764534
Protein evidence	Evidence at transcript level (all genes)
Ensembl	ENSG00000237452 (version 83.38)
Entrez gene	388553
UniProt	C9JSJ3 (UniProt - Inferred from homology)
neXtProt	NX_C9JSJ3
Antibodypedia	BHMG1 antibodies

PROTEIN BROWSER

BHMG1-001

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
BHMG1-001 ENSP00000402674 ENST00000457052	C9JSJ3 [Direct mapping] Basic helix-loop-helix and HMG box domain-containing protein 1 Show all	Predicted intracellular proteins Show all	GO:0003677 [DNA binding] GO:0003682 [chromatin binding] GO:0005634 [nucleus] GO:0006338 [chromatin remodeling] GO:0006351 [transcription, DNA-templated] GO:0006355 [regulation of transcription, DNA-templated] GO:0046983 [protein dimerization activity] Show all	638 aa 70.2 kDa	No	0

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.