Expression of GATS in cancer - Summary - The Human Protein Atlas

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GATS

TISSUE

CELL

PATHOLOGY

PATHOLOGY ATLAS

GENE/PROTEIN

Antibody validation

Dictionary


Level of antibody staining/expression
	High Medium Low Not detected

GENERAL INFORMATION
Gene name	GATS
Gene description	GATS, stromal antigen 3 opposite strand
Protein class	Predicted intracellular proteins
Predicted localization	Intracellular
Number of transcripts	2
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HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):	Expressed in all
HPA (cell line):	Cell line enhanced (A549)
HPA (normal tissue):	Tissue enhanced (cerebral cortex, skeletal muscle)

Protein evidence

Evidence at transcript level

Protein expression
normal tissue

Estimation of protein expression could not be performed. View primary data.

ANTIBODY IHC RELIABILITY
Data reliability description	RNA-based expert annotation gave inconclusive results. Pending external verification.
Reliability score	Uncertain based on 1 antibody. HPA043176
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PROGNOSTIC SUMMARY
Prognostic marker in cervical cancer (favourable).
Cervical cancer p<0.001 Show all

RNA EXPRESSION OVERVIEW
TCGA dataset RNA cancer category: Expressed in all

PROTEIN EXPRESSION

Colorectal cancer

Prostate cancer

STAINING SUMMARY

HPA043176

GENE INFORMATION
Gene name	GATS (HGNC Symbol)
Synonyms	DKFZp686B07267, STAG3OS
Description	GATS, stromal antigen 3 opposite strand (HGNC Symbol)
Entrez gene summary
Chromosome	7
Cytoband	q22.1
Chromosome location (bp)	100200653 - 100272218
Protein evidence	Evidence at transcript level (all genes)
Ensembl	ENSG00000239521 (version 83.38)
Entrez gene	352954
UniProt	Q8NAP1 (UniProt - Uncertain)
neXtProt	NX_Q8NAP1
Antibodypedia	GATS antibodies

PROTEIN BROWSER

GATS-004	GATS-014

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
GATS-004 ENSP00000479181 ENST00000454084	A0A087WV49 [Direct mapping] Putative protein GATS Show all	Predicted intracellular proteins Show all		185 aa 20 kDa	No	0
GATS-014 ENSP00000389760 ENST00000436886	Q8NAP1 [Direct mapping] Putative protein GATS Show all	Predicted intracellular proteins Show all		163 aa 17.8 kDa	No	0

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.