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BCKDHA

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:20.1TPM
GTEx:0.0RPKM
FANTOM5:62.7Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:High
Glandular cells:High
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA036640

  

Endothelial cells

 High  

Glandular cells

 High  

Peripheral nerve/ganglion

 Medium  
 
 

COLON - HPA RNA-seq

Average TPM

20.1
overview Male, age 54 Sample 1
TPM: 19.9
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 22.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 25.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 20.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 16.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 19.2
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 20.1
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 19.2
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 19.3
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 23.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 21
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 19.3
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 15.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

0.0

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 0.0
Samples: 149

Max RPKM: 0.5
Min RPKM: 0.0
Std RPKM: 0.0
Median RPKM: 0.0
GTEX-V955-1726-SM-4JBHF 60-69 years, male 0.5
GTEX-145MO-2626-SM-5QGPD 60-69 years, male 0.3
GTEX-14A5H-1626-SM-5SIAN 60-69 years, male 0.3
GTEX-ZAJG-2626-SM-5S2NU 50-59 years, female 0.3
GTEX-12KS4-2326-SM-5EGJB 30-39 years, male 0.2
GTEX-139TS-2226-SM-5J2N1 60-69 years, male 0.2
GTEX-13FH7-1626-SM-5J2O9 50-59 years, female 0.2
GTEX-13FTW-2126-SM-5K7YG 40-49 years, male 0.2
GTEX-13OVJ-1826-SM-5KM2D 50-59 years, female 0.2
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 0.2
Show all
Colon - Transverse
RPKM: 0.0
Samples: 196

Max RPKM: 0.6
Min RPKM: 0.0
Std RPKM: 0.1
Median RPKM: 0.0
GTEX-11I78-1226-SM-5A5K6 50-59 years, female 0.6
GTEX-1211K-1726-SM-5FQUJ 60-69 years, female 0.4
GTEX-V955-1626-SM-4JBHJ 60-69 years, male 0.4
GTEX-XBED-1526-SM-4AT5W 60-69 years, male 0.4
GTEX-14AS3-1126-SM-5Q5CR 40-49 years, female 0.3
GTEX-S7SF-1926-SM-4AT5B 20-29 years, female 0.3
GTEX-XUZC-1326-SM-4BRV2 30-39 years, female 0.3
GTEX-ZVP2-1526-SM-5NQ82 50-59 years, male 0.3
GTEX-11TTK-2426-SM-5PNYO 60-69 years, female 0.2
GTEX-1339X-1626-SM-5IJDN 40-49 years, male 0.2
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

62.7

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 62.7
FF:10014-101C5 62,83,84 years, mixed 62.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.