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PCDHGA12

COLON - Expression summary

RNA expression
HPA:0.4TPM
GTEx:0.7RPKM
FANTOM5:3.2Tags Per Million

COLON - Annotated protein expression
 

Antibody staining

Antibody HPA008755

  

Endothelial cells

 Low  

Glandular cells

 Low  
 
 
 

COLON - HPA RNA-seq

Average TPM

0.4
overview Male, age 54 Sample 1
TPM: 0.5
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 0.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 0.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 0.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 0.5
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 0.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 0.3
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 0.2
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 0.5
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 0
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 0.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 0.4
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 0.3
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

0.7

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 0.9
Samples: 149

Max RPKM: 2.8
Min RPKM: 0.2
Std RPKM: 0.4
Median RPKM: 0.8
GTEX-13VXT-2026-SM-5L3EW 20-29 years, female 2.8
GTEX-ZC5H-2426-SM-4WAZ6 40-49 years, female 2.1
GTEX-11P81-1426-SM-5P9JN 30-39 years, female 2.0
GTEX-11PRG-2026-SM-5GU5F 50-59 years, male 2.0
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 2.0
GTEX-147JS-2626-SM-5S2UX 60-69 years, male 1.9
GTEX-ZAB4-2426-SM-5HL8A 40-49 years, male 1.9
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 1.8
GTEX-14C39-1626-SM-5S2P4 40-49 years, male 1.8
GTEX-YEC3-2026-SM-4WWFL 50-59 years, male 1.7
Show all
Colon - Transverse
RPKM: 0.6
Samples: 196

Max RPKM: 2.1
Min RPKM: 0.0
Std RPKM: 0.4
Median RPKM: 0.5
GTEX-ZXES-1626-SM-5NQ7L 30-39 years, female 2.1
GTEX-13O3P-2326-SM-5KM55 50-59 years, male 1.9
GTEX-11P81-1126-SM-5GU5G 30-39 years, female 1.7
GTEX-11O72-2226-SM-5PNW2 40-49 years, male 1.6
GTEX-11WQK-2126-SM-5EQME 50-59 years, male 1.6
GTEX-145LS-2726-SM-5Q5D8 60-69 years, female 1.6
GTEX-ZYVF-2826-SM-5GIDK 50-59 years, female 1.6
GTEX-148VJ-2626-SM-5QGPI 70-79 years, male 1.5
GTEX-U3ZH-1326-SM-4DXSF 30-39 years, male 1.5
GTEX-117YX-0826-SM-5H11J 50-59 years, male 1.4
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

3.2

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 3.2
FF:10014-101C5 62,83,84 years, mixed 3.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.