Expression of ARMS2 in cancer - Summary - The Human Protein Atlas

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ARMS2

TISSUE

CELL

PATHOLOGY

PATHOLOGY ATLAS

GENE/PROTEIN

Antibody validation

Dictionary


Level of antibody staining/expression
	High Medium Low Not detected

GENERAL INFORMATION
Gene name	ARMS2
Gene description	Age-related maculopathy susceptibility 2
Protein class	Disease related genes Predicted intracellular proteins
Predicted localization	Intracellular
Number of transcripts	1
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HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):	Not detected
HPA (cell line):	Not detected
HPA (normal tissue):	Tissue enhanced (placenta, testis)

Protein evidence

Evidence at transcript level

Protein expression
normal tissue

Cytoplasmic expression in retina.

ANTIBODY IHC RELIABILITY
Data reliability description	External characterization data supports antibody staining but no internal RNA data available for correlation.
Reliability score	Approved based on 1 antibody. HPA067225
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PROGNOSTIC SUMMARY
Gene product is not prognostic.
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RNA EXPRESSION OVERVIEW
TCGA dataset RNA cancer category: Not detected

PROTEIN EXPRESSION

Colorectal cancer

Prostate cancer

STAINING SUMMARY

HPA067225

GENE INFORMATION
Gene name	ARMS2 (HGNC Symbol)
Synonyms	ARMD8, LOC387715
Description	Age-related maculopathy susceptibility 2 (HGNC Symbol)
Entrez gene summary	This gene encodes a protein that is thought to play a role in diseases in the elderly. Mutations in this gene have been associated with age-related macular degeneration. [provided by RefSeq, Oct 2008]
Chromosome	10
Cytoband	q26.13
Chromosome location (bp)	122454653 - 122457352
Protein evidence	Evidence at transcript level (all genes)
Ensembl	ENSG00000254636 (version 83.38)
Entrez gene	387715
UniProt	P0C7Q2 (UniProt - Evidence at transcript level)
neXtProt	NX_P0C7Q2
Antibodypedia	ARMS2 antibodies

PROTEIN BROWSER

ARMS2-001

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
ARMS2-001 ENSP00000436682 ENST00000528446	P0C7Q2 [Direct mapping] Age-related maculopathy susceptibility protein 2 Show all	Predicted intracellular proteins Disease related genes Show all	GO:0001895 [retina homeostasis] GO:0001917 [photoreceptor inner segment] GO:0005739 [mitochondrion] Show all	107 aa 11.4 kDa	No	0

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.