Expression of INAFM1 in cancer - Summary - The Human Protein Atlas

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INAFM1

TISSUE

CELL

PATHOLOGY

PATHOLOGY ATLAS

GENE/PROTEIN

Antibody validation

Dictionary


Level of antibody staining/expression
	High Medium Low Not detected

GENERAL INFORMATION
Gene name	INAFM1
Gene description	InaF-motif containing 1
Protein class	Predicted intracellular proteins
Predicted localization	Intracellular
Number of transcripts	1
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HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):	Expressed in all
HPA (cell line):	Expressed in all
HPA (normal tissue):	Expressed in all

Protein evidence

Evidence at transcript level

Protein expression
normal tissue

Estimation of protein expression could not be performed. View primary data.

ANTIBODY IHC RELIABILITY
Data reliability description	RNA-based expert annotation gave inconclusive results. Pending external verification.
Reliability score	Uncertain based on 1 antibody. HPA064015
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PROGNOSTIC SUMMARY
Prognostic marker in colorectal cancer (unfavourable) and renal cancer (unfavourable).
Colorectal cancer p<0.001 Renal cancer p<0.001 Show all

RNA EXPRESSION OVERVIEW
TCGA dataset RNA cancer category: Expressed in all

PROTEIN EXPRESSION

Colorectal cancer

Prostate cancer

STAINING SUMMARY

HPA064015

GENE INFORMATION
Gene name	INAFM1 (HGNC Symbol)
Synonyms	PRR24
Description	InaF-motif containing 1 (HGNC Symbol)
Entrez gene summary
Chromosome	19
Cytoband	q13.32
Chromosome location (bp)	47274453 - 47275707
Protein evidence	Evidence at transcript level (all genes)
Ensembl	ENSG00000257704 (version 83.38)
Entrez gene	255783
UniProt	C9JVW0 (UniProt - Predicted)
neXtProt	NX_C9JVW0
Antibodypedia	INAFM1 antibodies

PROTEIN BROWSER

INAFM1-001

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
INAFM1-001 ENSP00000447679 ENST00000552360	C9JVW0 [Direct mapping] Putative transmembrane protein INAFM1 Show all	MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins Predicted intracellular proteins Show all	GO:0016021 [integral component of membrane] Show all	142 aa 14.7 kDa	No	0

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.