Expression of RP11-108O10.8 in cancer - Summary - The Human Protein Atlas

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RP11-108O10.8

TISSUE

CELL

PATHOLOGY

PATHOLOGY ATLAS

GENE/PROTEIN

Antibody validation

Dictionary


Level of antibody staining/expression
	High Medium Low Not detected

GENERAL INFORMATION
Gene name	RP11-108O10.8
Gene description
Protein class	Predicted membrane proteins
Predicted localization	Membrane
Number of transcripts	2
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HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):	Not detected
HPA (cell line):	Cell line enhanced (CACO-2)
HPA (normal tissue):	Tissue enhanced (testis)

Protein evidence

Evidence at protein level

Protein expression
normal tissue

Estimation of protein expression could not be performed. View primary data.

ANTIBODY IHC RELIABILITY
Data reliability description	RNA-based expert annotation gave inconclusive results. Pending external verification. Caution, targets protein from more than one gene.
Reliability score	Uncertain based on 1 antibody. HPA038575
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PROGNOSTIC SUMMARY
Gene product is not prognostic.
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RNA EXPRESSION OVERVIEW
TCGA dataset RNA cancer category: Not detected

PROTEIN EXPRESSION

Colorectal cancer

Prostate cancer

STAINING SUMMARY

HPA038575

GENE INFORMATION
Gene name	RP11-108O10.8
Synonyms
Description
Entrez gene summary
Chromosome	11
Cytoband	q23.1
Chromosome location (bp)	111786286 - 111879425
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000258529 (version 83.38)
Entrez gene
UniProt
neXtProt
Antibodypedia	RP11-108O10.8 antibodies

PROTEIN BROWSER

RP11-108O10.8-001	RP11-108O10.8-002

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
RP11-108O10.8-001 ENSP00000482396 ENST00000622211	A0A087WZ62 [Direct mapping] Uncharacterized protein Show all	Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins # TM segments-based >9TM proteins predicted by MDM Show all	GO:0005737 [cytoplasm] GO:0016021 [integral component of membrane] GO:0016757 [transferase activity, transferring glycosyl groups] GO:0070042 [rRNA (uridine-N3-)-methyltransferase activity] GO:0070475 [rRNA base methylation] Show all	844 aa 95.9 kDa	No	>9
RP11-108O10.8-002 ENSP00000479200 ENST00000526587	A0A087WV58 [Direct mapping] Uncharacterized protein Show all	Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins # TM segments-based 1TM proteins predicted by MDM Show all	GO:0005737 [cytoplasm] GO:0016021 [integral component of membrane] GO:0016757 [transferase activity, transferring glycosyl groups] GO:0070042 [rRNA (uridine-N3-)-methyltransferase activity] GO:0070475 [rRNA base methylation] Show all	144 aa 16.5 kDa	No	1

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.