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CTB-133G6.1

COLON - Expression summary

RNA expression
HPA:1.1TPM
GTEx:2.6RPKM
FANTOM5:0.8Tags Per Million

COLON - Annotated protein expression
 

Antibody staining

Antibody HPA049151

  

Endothelial cells

 Low  

Glandular cells

 Medium  
 
 
 

COLON - HPA RNA-seq

Average TPM

1.1
overview Male, age 54 Sample 1
TPM: 0.5
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 1.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 0.4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 0.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 0.7
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 1.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 0.9
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 0.5
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 1.3
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 0.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 2.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 2.6
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 1.3
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

2.6

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 3.5
Samples: 149

Max RPKM: 14.0
Min RPKM: 0.2
Std RPKM: 2.6
Median RPKM: 3.0
GTEX-XAJ8-0726-SM-47JY5 40-49 years, male 14.0
GTEX-14E6E-1726-SM-5S2R6 30-39 years, male 10.4
GTEX-11ZTT-1626-SM-5EQKR 60-69 years, female 10.3
GTEX-ZXES-1726-SM-5E43G 30-39 years, female 9.7
GTEX-YEC3-2026-SM-4WWFL 50-59 years, male 9.6
GTEX-1211K-1826-SM-5EGJ2 60-69 years, female 8.6
GTEX-WFG7-1626-SM-4LVMF 20-29 years, male 8.4
GTEX-ZP4G-1526-SM-57WE5 20-29 years, female 8.3
GTEX-ZYFG-1826-SM-5GZWX 60-69 years, female 8.3
GTEX-WFG8-1726-SM-4LVM6 20-29 years, male 8.0
Show all
Colon - Transverse
RPKM: 1.9
Samples: 196

Max RPKM: 14.4
Min RPKM: 0.0
Std RPKM: 2.5
Median RPKM: 0.9
GTEX-X5EB-0926-SM-46MVT 40-49 years, male 14.4
GTEX-XAJ8-0426-SM-47JYJ 40-49 years, male 12.9
GTEX-13FH7-1526-SM-5J2N6 50-59 years, female 10.8
GTEX-ZV6S-1226-SM-59HLH 40-49 years, female 10.4
GTEX-YEC4-1926-SM-5IFHJ 40-49 years, male 9.7
GTEX-Y114-1526-SM-4TT79 50-59 years, female 8.9
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 8.5
GTEX-WEY5-1426-SM-4LMJ3 40-49 years, female 8.5
GTEX-RU1J-1326-SM-46MUL 20-29 years, female 8.3
GTEX-RWS6-1826-SM-47JXX 60-69 years, female 7.2
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

0.8

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 0.8
FF:10014-101C5 62,83,84 years, mixed 0.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.