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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
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ZNF587B
  • TISSUE

  • CELL

  • PATHOLOGY

PATHOLOGY ATLAS

GENE/PROTEIN

Antibody validation

Dictionary

Level of antibody staining/expression





High
Medium
Low
Not detected

GENERAL INFORMATION

Gene name

ZNF587B

Gene description

Zinc finger protein 587B

Protein class

Predicted intracellular proteins

Predicted localization

Intracellular

Number of transcripts

3
SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):Expressed in all
HPA (cell line):Expressed in all
HPA (normal tissue):Mixed

Protein evidence

Evidence at protein level

Protein expression
normal tissue

Estimation of protein expression could not be performed. View primary data.

ANTIBODY IHC RELIABILITY

Data reliability
description

RNA-based expert annotation gave inconclusive results. Pending external verification. Caution, targets protein from more than one gene.

Reliability score

Uncertain based on 2 antibodies.
HPA043800 , HPA053762
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PROGNOSTIC SUMMARY

Prognostic marker in prostate cancer (unfavourable) and melanoma (unfavourable).
Prostate cancer p<0.001
Melanoma p<0.001
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RNA EXPRESSION OVERVIEW

TCGA dataset
RNA cancer category: Expressed in all

PROTEIN EXPRESSION

Colorectal cancer
Breast cancer
Prostate cancer
Lung cancer
Liver cancer

STAINING SUMMARY

HPA043800
HPA053762

Cancer

Cancer staining

Breast cancer
Carcinoid
Cervical cancer
Colorectal cancer
Endometrial cancer
Glioma
Head and neck cancer
Liver cancer
Lung cancer
Lymphoma
 

Cancer

Cancer staining

Melanoma
Ovarian cancer
Pancreatic cancer
Prostate cancer
Renal cancer
Skin cancer
Stomach cancer
Testis cancer
Thyroid cancer
Urothelial cancer

Staining summary

Adenocarcinoma of head & neck showed strong cytoplasmic immunoreactivity. Cases of melanomas, endometrial and pancreatic cancers were moderately stained. Remaining cancers were in general negative.

Cancer

Cancer staining

Breast cancer
Carcinoid
Cervical cancer
Colorectal cancer
Endometrial cancer
Glioma
Head and neck cancer
Liver cancer
Lung cancer
Lymphoma
 

Cancer

Cancer staining

Melanoma
Ovarian cancer
Pancreatic cancer
Prostate cancer
Renal cancer
Skin cancer
Stomach cancer
Testis cancer
Thyroid cancer
Urothelial cancer

Staining summary

Cases of colorectal, prostate, skin, urothelial, stomach and liver cancers showed moderate to strong cytoplasmic and/or nuclear staining. Remaining tumor cells were negative.

GENE INFORMATION

Gene name

ZNF587B

Synonyms

Description

Zinc finger protein 587B (HGNC Symbol)

Entrez gene summary

Chromosome

19

Cytoband

q13.43

Chromosome location (bp)

57819741 - 57846238

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000269343 (version 83.38)

Entrez gene

100293516

UniProt

E7ETH6 (UniProt - Evidence at protein level)

neXtProt

NX_E7ETH6

Antibodypedia

ZNF587B antibodies

PROTEIN BROWSER

ZNF587B-001
ZNF587B-002
ZNF587B-003

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

ZNF587B-001
ENSP00000392410
ENST00000442832
E7ETH6 [Direct mapping]
Zinc finger protein 587B
Show all
Predicted intracellular proteins
Show all
GO:0000977 [RNA polymerase II regulatory region sequence-specific DNA binding]
GO:0003676 [nucleic acid binding]
GO:0003700 [transcription factor activity, sequence-specific DNA binding]
GO:0005622 [intracellular]
GO:0005654 [nucleoplasm]
GO:0006355 [regulation of transcription, DNA-templated]
GO:0045892 [negative regulation of transcription, DNA-templated]
GO:0046872 [metal ion binding]
Show all
402 aa
45.5 kDa
No 0
ZNF587B-002
ENSP00000469623
ENST00000594901
M0QY62 [Direct mapping]
Zinc finger protein 587B
Show all
Predicted intracellular proteins
Show all
GO:0003676 [nucleic acid binding]
GO:0005622 [intracellular]
GO:0006355 [regulation of transcription, DNA-templated]
GO:0046872 [metal ion binding]
Show all
633 aa
72.2 kDa
No 0
ZNF587B-003
ENSP00000472004
ENST00000594328
M0R1N2 [Direct mapping]
Zinc finger protein 587B
Show all
Predicted intracellular proteins
Show all
GO:0003676 [nucleic acid binding]
GO:0046872 [metal ion binding]
Show all
432 aa
49.2 kDa
No 0

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