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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
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AC009133.22
  • TISSUE

  • CELL

  • PATHOLOGY

PATHOLOGY ATLAS

GENE/PROTEIN

Antibody validation

Dictionary

Level of antibody staining/expression





High
Medium
Low
Not detected

GENERAL INFORMATION

Gene name

AC009133.22

Gene description

Protein class

Predicted secreted proteins

Predicted localization

Secreted

Number of transcripts

1
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HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):Not detected
HPA (cell line):Cell line enhanced (BEWO, EFO-21, SH-SY5Y)
HPA (normal tissue):Tissue enhanced (colon, duodenum, spleen)

Protein evidence

Evidence at protein level

Protein expression
normal tissue

Estimation of protein expression could not be performed. View primary data.

ANTIBODY IHC RELIABILITY

Data reliability
description

RNA-based expert annotation gave inconclusive results. Pending external verification. Caution, targets protein from more than one gene.

Reliability score

Uncertain based on 1 antibody.
HPA011887
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PROGNOSTIC SUMMARY

Gene product is not prognostic.
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RNA EXPRESSION OVERVIEW

TCGA dataset
RNA cancer category: Not detected

PROTEIN EXPRESSION

Colorectal cancer
Breast cancer
Prostate cancer
Lung cancer

STAINING SUMMARY

HPA011887

Cancer

Cancer staining

Breast cancer
Carcinoid
Cervical cancer
Colorectal cancer
Endometrial cancer
Glioma
Head and neck cancer
Liver cancer
Lung cancer
Lymphoma
 

Cancer

Cancer staining

Melanoma
Ovarian cancer
Pancreatic cancer
Prostate cancer
Renal cancer
Skin cancer
Stomach cancer
Testis cancer
Thyroid cancer
Urothelial cancer

Staining summary

Hepatocellular carcinomas, most endometrial cancers, cases of renal adenocarcinomas, urothelial cancers and testicular seminomas displayed moderate to strong cytoplasmic and nuclear staining. The remaining tumors were in general weakly stained or negative.

GENE INFORMATION

Gene name

AC009133.22

Synonyms

Description

Entrez gene summary

Chromosome

16

Cytoband

p11.2

Chromosome location (bp)

29663279 - 29695144

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000277669 (version 83.38)

Entrez gene

UniProt

neXtProt

Antibodypedia

AC009133.22 antibodies

PROTEIN BROWSER

AC009133.22-001

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

AC009133.22-001
ENSP00000404873
ENST00000449759
C9JCJ5 [Direct mapping]
Uncharacterized protein
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Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
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GO:0004514 [nicotinate-nucleotide diphosphorylase (carboxylating) activity]
GO:0009435 [NAD biosynthetic process]
GO:0016763 [transferase activity, transferring pentosyl groups]
Show all
165 aa
17 kDa
Yes 0

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