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AOC1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:144.1TPM
GTEx:29.9RPKM
FANTOM5:462.7Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glandular cells:High
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA031032

  

Antibody HPA031033

  

Endothelial cells

 Low   Low  

Glandular cells

 High   High  

Peripheral nerve/ganglion

 Medium   Not detected  
   
   

COLON - HPA RNA-seq

Average TPM

144.1
overview Male, age 54 Sample 1
TPM: 257.9
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 160.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 145.9
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 215.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 89.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 63
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 85.4
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 140.5
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 74
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 133.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 237.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 131.3
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 139
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

29.9

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 0.7
Samples: 149

Max RPKM: 21.1
Min RPKM: 0.0
Std RPKM: 2.5
Median RPKM: 0.0
GTEX-YEC3-2026-SM-4WWFL 50-59 years, male 21.1
GTEX-XBED-1726-SM-47JYO 60-69 years, male 15.2
GTEX-Y5LM-1426-SM-5RQJL 40-49 years, female 12.0
GTEX-V955-1726-SM-4JBHF 60-69 years, male 7.3
GTEX-11EQ9-1526-SM-5PNY7 30-39 years, male 6.5
GTEX-ZPCL-1626-SM-57WGC 60-69 years, female 5.8
GTEX-146FH-2426-SM-5Q5EW 50-59 years, female 5.0
GTEX-YJ8A-1726-SM-5P9IQ 20-29 years, male 4.7
GTEX-WQUQ-2626-SM-4MVNP 60-69 years, male 3.8
GTEX-XAJ8-0726-SM-47JY5 40-49 years, male 3.6
Show all
Colon - Transverse
RPKM: 52.1
Samples: 196

Max RPKM: 173.0
Min RPKM: 0.0
Std RPKM: 46.3
Median RPKM: 51.0
GTEX-Y5LM-1526-SM-4VDTA 40-49 years, female 173.0
GTEX-ZVT2-1926-SM-5GU5T 50-59 years, female 171.6
GTEX-131XG-1826-SM-5LZV4 50-59 years, female 170.1
GTEX-14E6E-1526-SM-5RQIG 30-39 years, male 169.7
GTEX-R55G-1226-SM-48FDC 40-49 years, female 164.1
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 143.4
GTEX-132AR-2726-SM-5PNVN 50-59 years, female 138.0
GTEX-Q2AI-0926-SM-48U1F 40-49 years, male 135.8
GTEX-1122O-1526-SM-5N9CL 60-69 years, female 135.7
GTEX-ZYWO-1626-SM-5E44H 40-49 years, female 132.0
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

462.7

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 462.7
FF:10014-101C5 62,83,84 years, mixed 462.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.