Tissue expression of UPF1 - Staining in skin

SKIN - Expression summary

Protein expression

RNA expression

HPA:	25.8	TPM
GTEx:	24.0	RPKM

SKIN 1 - Annotated protein expression

Annotated protein
expression

Fibroblasts:	Low
Keratinocytes:	Medium
Langerhans:	Medium
Melanocytes:	Low

Antibody staining	Antibody HPA019587
Fibroblasts	Low
Keratinocytes	Medium
Langerhans	Medium
Melanocytes	Low

SKIN 2 - Annotated protein expression

Annotated protein
expression

Epidermal cells:	Medium

Antibody staining	Antibody HPA019587	Antibody HPA020857
Epidermal cells	Medium	Medium

SKIN - HPA RNA-seq

Average TPM	25.8

Female, age 34

Sample 1
TPM: 21.3

Cell types%

Keratinocytes: 60
Other cell types: 40

Female, age 30

Sample 2
TPM: 20.2

Cell types%

Keratinocytes: 55
Other cell types: 45

Male, age 57

Sample 3
TPM: 36.1

SKIN - GTEx RNA-seq

Average RPKM	24.0

GTEx sample id

Sample description

RPKM

Skin - Not Sun Exposed (Suprapubic)
RPKM: 23.0

Samples: 250

Max RPKM: 40.1
Min RPKM: 13.0
Std RPKM: 4.0
Median RPKM: 22.5

GTEX-11P82-1426-SM-5BC5L

20-29 years, male

40.1

GTEX-X585-2426-SM-46MW2

50-59 years, male

38.9

GTEX-WHSE-0126-SM-3NMBT

20-29 years, male

35.6

GTEX-1497J-0226-SM-5QGPU

60-69 years, male

33.4

GTEX-13OW5-2326-SM-5L3HO

60-69 years, male

33.1

GTEX-11WQC-1826-SM-5GU59

60-69 years, male

32.5

GTEX-XXEK-1626-SM-4BRUZ

50-59 years, male

31.5

GTEX-13IVO-0726-SM-5LZYV

70-79 years, male

31.3

GTEX-U8XE-0226-SM-4E3J3

30-39 years, male

30.9

GTEX-1399Q-2326-SM-5KM2X

40-49 years, male

30.7

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Skin - Sun Exposed (Lower leg)
RPKM: 24.6

Samples: 357

Max RPKM: 40.7
Min RPKM: 13.4
Std RPKM: 4.1
Median RPKM: 24.4

GTEX-ZTX8-1426-SM-5DUVO

20-29 years, male

40.7

GTEX-13NYS-0126-SM-5MR3W

60-69 years, male

37.8

GTEX-XYKS-2126-SM-4E3IB

60-69 years, female

37.6

GTEX-Y114-2426-SM-4TT8A

50-59 years, female

37.1

GTEX-12WSJ-1826-SM-5GCNY

40-49 years, female

35.9

GTEX-11WQK-0526-SM-5EQLD

50-59 years, male

35.7

GTEX-WFON-2126-SM-3LK7O

40-49 years, male

34.2

GTEX-13YAN-0326-SM-5O9DF

60-69 years, male

33.0

GTEX-OXRK-0226-SM-3NB2G

50-59 years, female

32.8

GTEX-WXYG-2326-SM-4E3I6

50-59 years, female

32.6

Show all

SKIN - FANTOM5 CAGE
No Fantom CAGE analysis found for this gene / tissue