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C19orf60

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:9.1TPM
GTEx:30.9RPKM
FANTOM5:42.4Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA043414

  

Endothelial cells

 Medium  

Glandular cells

 Medium  

Peripheral nerve/ganglion

 Medium  
 
 

COLON - HPA RNA-seq

Average TPM

9.1
overview Male, age 54 Sample 1
TPM: 29.7
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 14.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 18.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 21.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 12.7
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 2.3
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 0.1
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 1.8
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 0
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 4.3
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 1.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 7.2
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 3.7
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

30.9

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 31.1
Samples: 149

Max RPKM: 64.0
Min RPKM: 9.6
Std RPKM: 10.5
Median RPKM: 28.4
GTEX-Z93S-2626-SM-57WBX 50-59 years, male 64.0
GTEX-139TS-2226-SM-5J2N1 60-69 years, male 62.8
GTEX-11DXY-2026-SM-5N9CZ 60-69 years, male 61.6
GTEX-X15G-1526-SM-4PQZM 50-59 years, female 56.7
GTEX-145LS-2926-SM-5O99G 60-69 years, female 56.4
GTEX-13OW6-2226-SM-5N9FL 50-59 years, male 54.2
GTEX-145MH-2726-SM-5QGQ6 50-59 years, male 52.6
GTEX-11EI6-2626-SM-5PNVT 60-69 years, male 51.3
GTEX-132NY-2726-SM-5PNY2 60-69 years, male 51.3
GTEX-147JS-2626-SM-5S2UX 60-69 years, male 51.2
Show all
Colon - Transverse
RPKM: 30.8
Samples: 196

Max RPKM: 64.5
Min RPKM: 11.2
Std RPKM: 8.1
Median RPKM: 29.7
GTEX-147JS-2526-SM-5S2Q8 60-69 years, male 64.5
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 60.6
GTEX-11TTK-2426-SM-5PNYO 60-69 years, female 54.2
GTEX-13FHP-2426-SM-5KLZ5 50-59 years, male 50.5
GTEX-139TS-1926-SM-5IJFO 60-69 years, male 49.8
GTEX-Y3IK-1826-SM-4WWDS 50-59 years, female 49.2
GTEX-13O3O-2526-SM-5L3DR 60-69 years, female 48.6
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 48.5
GTEX-XV7Q-2126-SM-4BRVX 40-49 years, female 48.1
GTEX-TML8-1326-SM-4DXTO 40-49 years, female 46.7
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

42.4

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 42.4
FF:10014-101C5 62,83,84 years, mixed 42.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.