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PAFAH1B1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:37.3TPM
GTEx:28.0RPKM
FANTOM5:103.9Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
Peripheral nerve/ganglion:High
 

Antibody staining

Antibody HPA020036

  

Antibody CAB004489

  

Endothelial cells

 Medium   Medium  

Glandular cells

 Medium   High  

Peripheral nerve/ganglion

 High   Medium  
   
   
   

COLON - HPA RNA-seq

Average TPM

37.3
overview Male, age 54 Sample 1
TPM: 34.5
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 31.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 28
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 45.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 26.7
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 38.9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 42.1
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 37.5
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 43.5
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 35.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 43.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 43.6
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 33.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

28.0

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 31.3
Samples: 149

Max RPKM: 42.4
Min RPKM: 22.5
Std RPKM: 3.7
Median RPKM: 31.0
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 42.4
GTEX-13OW6-2226-SM-5N9FL 50-59 years, male 41.5
GTEX-Y9LG-1326-SM-4VBQB 30-39 years, male 39.6
GTEX-13U4I-2626-SM-5SI9C 40-49 years, female 39.5
GTEX-14E6C-2226-SM-5QGQG 40-49 years, male 39.5
GTEX-145ME-1126-SM-5SIAT 40-49 years, female 39.2
GTEX-ZYT6-2826-SM-5GICX 30-39 years, male 39.1
GTEX-13VXT-2026-SM-5L3EW 20-29 years, female 38.6
GTEX-11ZU8-1126-SM-5EQ5K 60-69 years, male 38.0
GTEX-111YS-1826-SM-5GIEP 60-69 years, male 37.9
Show all
Colon - Transverse
RPKM: 25.4
Samples: 196

Max RPKM: 40.1
Min RPKM: 10.7
Std RPKM: 5.5
Median RPKM: 24.0
GTEX-X5EB-0926-SM-46MVT 40-49 years, male 40.1
GTEX-13OVI-2026-SM-5J1MU 60-69 years, female 39.2
GTEX-14AS3-1126-SM-5Q5CR 40-49 years, female 39.2
GTEX-ZYFC-2626-SM-5NQ6S 50-59 years, male 39.1
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 38.6
GTEX-11O72-2226-SM-5PNW2 40-49 years, male 38.2
GTEX-YEC4-1926-SM-5IFHJ 40-49 years, male 37.7
GTEX-148VJ-2626-SM-5QGPI 70-79 years, male 36.7
GTEX-U3ZH-1326-SM-4DXSF 30-39 years, male 36.2
GTEX-S341-1426-SM-4AD6U 40-49 years, female 35.8
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

103.9

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 103.9
FF:10014-101C5 62,83,84 years, mixed 103.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.