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RPS20

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:1063.6TPM
GTEx:215.5RPKM
FANTOM5:778.9Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
 

Antibody staining

Antibody HPA003570

  

Endothelial cells

 Low  

Glandular cells

 Medium  
 

COLON - HPA RNA-seq

Average TPM

1063.6
overview Male, age 54 Sample 1
TPM: 1034
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 1386.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 1176.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 1077.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 1371.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 1106.4
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 1063
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 985.5
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 891.9
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 997
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 767.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 1018.9
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 952.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

215.5

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 246.9
Samples: 149

Max RPKM: 478.4
Min RPKM: 156.7
Std RPKM: 55.4
Median RPKM: 236.3
GTEX-1477Z-2126-SM-5Q5CM 60-69 years, male 478.4
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 389.4
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 377.9
GTEX-147GR-2826-SM-5RQK8 60-69 years, male 374.7
GTEX-13X6K-2726-SM-5O9DG 60-69 years, female 359.8
GTEX-14C5O-2626-SM-5RQI5 60-69 years, male 358.2
GTEX-ZPCL-1626-SM-57WGC 60-69 years, female 351.8
GTEX-12ZZY-2726-SM-5EQ45 60-69 years, male 345.5
GTEX-13FHO-2726-SM-5K7VG 60-69 years, male 342.6
GTEX-13PL7-2426-SM-5J2N3 60-69 years, female 340.1
Show all
Colon - Transverse
RPKM: 191.6
Samples: 196

Max RPKM: 381.6
Min RPKM: 104.9
Std RPKM: 51.0
Median RPKM: 180.4
GTEX-ZYVF-2826-SM-5GIDK 50-59 years, female 381.6
GTEX-13OVI-2026-SM-5J1MU 60-69 years, female 369.8
GTEX-1339X-1626-SM-5IJDN 40-49 years, male 352.1
GTEX-148VJ-2626-SM-5QGPI 70-79 years, male 330.8
GTEX-ZXES-1626-SM-5NQ7L 30-39 years, female 317.1
GTEX-14C38-2626-SM-5RQI4 50-59 years, male 310.0
GTEX-11TTK-2426-SM-5PNYO 60-69 years, female 302.5
GTEX-11WQK-2126-SM-5EQME 50-59 years, male 295.4
GTEX-Z93S-2426-SM-5HL8N 50-59 years, male 293.9
GTEX-147JS-2526-SM-5S2Q8 60-69 years, male 291.4
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

778.9

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 778.9
FF:10014-101C5 62,83,84 years, mixed 778.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.