Tissue expression of CD4 - Staining in adipose tissue - The Human Protein Atlas

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CD4

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TISSUE

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CELL

PATHOLOGY

TISSUE ATLAS PRIMARY DATA ADIPOSE TISSUE

GENE/PROTEIN

Antibody validation

Dictionary
	Soft tissue


Tissue proteome
	Adipose

SOFT TISSUE - Expression summary

Protein expression

h

m

l

n

RNA expression

HPA:	53.2	TPM
GTEx:	14.4	RPKM
FANTOM5:	36.7	Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Chondrocytes:	Not detected
Fibroblasts:	Not detected
Peripheral nerve:	Not detected
Adipocytes:	Not detected

Antibody staining	Antibody HPA004252		Antibody HPA004472		Antibody CAB000011		Antibody CAB068180
Chondrocytes	Low		Not detected		Not detected		Not detected
Fibroblasts	Not detected		Low		Not detected		Not detected
Peripheral nerve	Not detected		Low
Adipocytes	Not detected		Not detected

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Not detected
Fibroblasts:	Not detected
Peripheral nerve:	Not detected

Antibody staining	Antibody HPA004252		Antibody HPA004472		Antibody CAB000011		Antibody CAB068180
Adipocytes	Not detected		Not detected		Not detected		Not detected
Fibroblasts	Low		Not detected		Not detected		Not detected
Peripheral nerve	Not detected		Low		Not detected		Not detected

ADIPOSE TISSUE - HPA RNA-seq

Average TPM	53.2

N/A

Female, age 80

Sample 1
TPM: 16.5

Cell types%

Adipocytes: 95
Other cell types: 5

N/A

Female, age 45

Sample 2
TPM: 15.7

N/A

Female, age 57

Sample 3
TPM: 15.3

Cell types%

Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5

overview

Female, age 74

Sample 4
TPM: 72.7

Cell types%

Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5

overview

Female, age 59

Sample 5
TPM: 145.6

Cell types%

Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM	14.4

GTEx sample id

Sample description

RPKM

Adipose - Subcutaneous
RPKM: 15.1

Samples: 350

Max RPKM: 49.3
Min RPKM: 2.1
Std RPKM: 7.5
Median RPKM: 13.6

GTEX-ZVZO-0226-SM-5A5LA

40-49 years, male

49.3

GTEX-WL46-0326-SM-3LK6Y

50-59 years, male

42.5

GTEX-111VG-2326-SM-5N9BK

60-69 years, male

41.8

GTEX-13O3Q-2326-SM-5KM3G

50-59 years, male

41.0

GTEX-Q734-1826-SM-2I3EL

40-49 years, female

40.1

GTEX-13JVG-0226-SM-5J1MW

60-69 years, male

37.4

GTEX-13OVL-0326-SM-5IJCS

50-59 years, male

36.5

GTEX-WVLH-0226-SM-3MJG6

50-59 years, male

36.3

GTEX-139TU-0226-SM-5J1NM

60-69 years, male

36.2

GTEX-R55F-1426-SM-2TF53

50-59 years, male

36.0

Show all

Adipose - Visceral (Omentum)
RPKM: 13.4

Samples: 227

Max RPKM: 44.5
Min RPKM: 2.4
Std RPKM: 7.4
Median RPKM: 12.3

GTEX-13FHO-2026-SM-5J1OA

60-69 years, male

44.5

GTEX-13X6I-1526-SM-5SIAC

60-69 years, male

43.4

GTEX-UPK5-1826-SM-3GAEB

40-49 years, male

40.8

GTEX-13N11-1826-SM-5IJDS

50-59 years, female

39.9

GTEX-ZT9X-0926-SM-5O9C4

40-49 years, male

37.0

GTEX-132AR-0526-SM-5J2MJ

50-59 years, female

33.7

GTEX-XYKS-1826-SM-4E3JV

60-69 years, female

31.0

GTEX-131XF-0726-SM-5GIE5

60-69 years, male

30.6

GTEX-146FH-2026-SM-5SI9I

50-59 years, female

27.7

GTEX-11PRG-1526-SM-5HL6Z

50-59 years, male

27.6

Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million	36.7

FANTOM5 sample id

Sample description

Tags Per Million

Adipose tissue
Tags Per Million: 36.7

65,65,76 years, mixed

36.7

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.