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CD4

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:25.5TPM
GTEx:5.3RPKM
FANTOM5:11.6Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA004252

  

Antibody HPA004472

  

Antibody CAB000011

  

Antibody CAB068180

  

Endothelial cells

 Not detected   Low   Not detected   Not detected  

Glandular cells

 Low   Not detected   Not detected   Not detected  

Peripheral nerve/ganglion

 Not detected   Not detected  
       
       
       

COLON - HPA RNA-seq

Average TPM

25.5
overview Male, age 54 Sample 1
TPM: 16.4
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 24.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 12.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 7.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 35.3
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 20.7
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 29.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 30.9
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 37.1
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 20.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 40.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 26.9
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 28.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

5.3

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 3.3
Samples: 149

Max RPKM: 11.0
Min RPKM: 0.6
Std RPKM: 1.7
Median RPKM: 3.0
GTEX-WFON-1326-SM-4LVMN 40-49 years, male 11.0
GTEX-ZAB4-2426-SM-5HL8A 40-49 years, male 10.8
GTEX-YEC3-2026-SM-4WWFL 50-59 years, male 9.3
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 8.6
GTEX-ZV6S-1126-SM-57WE9 40-49 years, female 7.0
GTEX-11ZTT-1626-SM-5EQKR 60-69 years, female 6.8
GTEX-ZQG8-2426-SM-57WEE 60-69 years, female 6.6
GTEX-Y114-1626-SM-4TT7I 50-59 years, female 6.5
GTEX-13X6K-2726-SM-5O9DG 60-69 years, female 6.0
GTEX-XUZC-1526-SM-4BRV4 30-39 years, female 6.0
Show all
Colon - Transverse
RPKM: 6.8
Samples: 196

Max RPKM: 29.3
Min RPKM: 0.5
Std RPKM: 4.4
Median RPKM: 5.6
GTEX-ZXES-1626-SM-5NQ7L 30-39 years, female 29.3
GTEX-147JS-2526-SM-5S2Q8 60-69 years, male 23.0
GTEX-13O3O-2526-SM-5L3DR 60-69 years, female 22.2
GTEX-13OVJ-1726-SM-5IJDZ 50-59 years, female 22.0
GTEX-R53T-1326-SM-48FCQ 50-59 years, female 20.4
GTEX-Q2AH-1226-SM-48TZL 40-49 years, male 18.7
GTEX-ZAB4-2226-SM-5HL97 40-49 years, male 18.1
GTEX-11EM3-1526-SM-5A5KN 20-29 years, female 17.1
GTEX-XMK1-1726-SM-4B64Z 40-49 years, male 16.2
GTEX-13OW6-2126-SM-5N9GL 50-59 years, male 13.6
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

11.6

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 11.6
FF:10014-101C5 62,83,84 years, mixed 11.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.