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TCEB3

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:15.1TPM
GTEx:9.6RPKM
FANTOM5:27.8Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
Peripheral nerve/ganglion:Low
 

Antibody staining

Antibody HPA005910

  

Endothelial cells

 Medium  

Glandular cells

 Medium  

Peripheral nerve/ganglion

 Low  
 
 

COLON - HPA RNA-seq

Average TPM

15.1
overview Male, age 54 Sample 1
TPM: 18.8
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 14.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 11.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 12.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 10.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 16.6
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 16.9
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 14.9
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 16.1
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 15.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 18.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 17.7
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 11.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

9.6

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 9.4
Samples: 149

Max RPKM: 15.1
Min RPKM: 6.3
Std RPKM: 1.4
Median RPKM: 9.4
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 15.1
GTEX-139D8-2926-SM-5IJBM 30-39 years, female 13.9
GTEX-145ME-1126-SM-5SIAT 40-49 years, female 12.7
GTEX-131XG-1526-SM-5GCNQ 50-59 years, female 12.4
GTEX-ZPIC-2626-SM-57WE2 40-49 years, female 12.0
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 11.8
GTEX-14C39-1626-SM-5S2P4 40-49 years, male 11.8
GTEX-117YX-0526-SM-5EGJH 50-59 years, male 11.7
GTEX-11I78-1326-SM-5PNY9 50-59 years, female 11.7
GTEX-ZY6K-1326-SM-5GZWP 50-59 years, male 11.7
Show all
Colon - Transverse
RPKM: 9.8
Samples: 196

Max RPKM: 19.5
Min RPKM: 4.5
Std RPKM: 1.5
Median RPKM: 9.6
GTEX-14C38-2626-SM-5RQI4 50-59 years, male 19.5
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 15.0
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 14.3
GTEX-1339X-1626-SM-5IJDN 40-49 years, male 13.4
GTEX-R53T-1326-SM-48FCQ 50-59 years, female 13.4
GTEX-13S86-1626-SM-5Q5C5 40-49 years, male 12.9
GTEX-OXRK-1726-SM-3NB16 50-59 years, female 12.7
GTEX-X5EB-0926-SM-46MVT 40-49 years, male 12.6
GTEX-PWOO-1326-SM-48TCJ 40-49 years, female 12.4
GTEX-V955-1626-SM-4JBHJ 60-69 years, male 12.3
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

27.8

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 27.8
FF:10014-101C5 62,83,84 years, mixed 27.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.