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KDM5D

COLON - Expression summary

RNA expression
HPA:7.4TPM
GTEx:14.4RPKM
FANTOM5:34.0Tags Per Million

COLON - Annotated protein expression
 

Antibody staining

Antibody HPA049086

  

Antibody HPA060807

  

Endothelial cells

 Not detected   Not detected  

Glandular cells

 Not detected   Medium  

Peripheral nerve/ganglion

 Not detected  
      
   
   

COLON - HPA RNA-seq

Average TPM

7.4
overview Male, age 54 Sample 1
TPM: 16.8
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 0
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 12.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 13.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 0
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 0
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 18.9
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 0
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 21.9
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 11.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 0
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 0
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 0
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

14.4

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 15.6
Samples: 149

Max RPKM: 45.5
Min RPKM: 0.0
Std RPKM: 13.8
Median RPKM: 20.2
GTEX-V955-1726-SM-4JBHF 60-69 years, male 45.5
GTEX-14E6C-2226-SM-5QGQG 40-49 years, male 44.0
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 40.4
GTEX-WQUQ-2626-SM-4MVNP 60-69 years, male 37.8
GTEX-12KS4-2326-SM-5EGJB 30-39 years, male 37.2
GTEX-14A5H-1626-SM-5SIAN 60-69 years, male 36.4
GTEX-12WSL-1826-SM-5LZW9 50-59 years, male 36.2
GTEX-ZTTD-2626-SM-57WEX 50-59 years, male 36.0
GTEX-117YX-0526-SM-5EGJH 50-59 years, male 34.7
GTEX-13OW5-2826-SM-5KM1G 60-69 years, male 34.7
Show all
Colon - Transverse
RPKM: 13.5
Samples: 196

Max RPKM: 40.6
Min RPKM: 0.0
Std RPKM: 12.2
Median RPKM: 16.8
GTEX-ZAB4-2226-SM-5HL97 40-49 years, male 40.6
GTEX-QEL4-1926-SM-4R1JI 50-59 years, male 38.7
GTEX-WQUQ-2526-SM-4MVNO 60-69 years, male 36.2
GTEX-12KS4-2426-SM-5LU8P 30-39 years, male 35.2
GTEX-VJYA-2026-SM-4KL1K 60-69 years, male 34.3
GTEX-147JS-2526-SM-5S2Q8 60-69 years, male 33.9
GTEX-1339X-1626-SM-5IJDN 40-49 years, male 33.6
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 32.3
GTEX-V955-1626-SM-4JBHJ 60-69 years, male 32.0
GTEX-XXEK-1926-SM-4BRVD 50-59 years, male 31.2
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

34.0

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 34.0
FF:10014-101C5 62,83,84 years, mixed 34.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.