Fields »
ABOUT
HELP
BLOG
MAP4K5

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:15.5TPM
GTEx:14.5RPKM
FANTOM5:41.1Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA036696

  

Endothelial cells

 Medium  

Glandular cells

 Medium  

Peripheral nerve/ganglion

 Medium  
 
 
 

COLON - HPA RNA-seq

Average TPM

15.5
overview Male, age 54 Sample 1
TPM: 20.6
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 18.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 16.2
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 15.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 13
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 12.1
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 14.4
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 14.4
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 17.4
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 13.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 18.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 15.2
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 13.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

14.5

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 17.5
Samples: 149

Max RPKM: 34.6
Min RPKM: 9.8
Std RPKM: 3.3
Median RPKM: 17.0
GTEX-14E6C-2226-SM-5QGQG 40-49 years, male 34.6
GTEX-145LS-2926-SM-5O99G 60-69 years, female 26.5
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 25.9
GTEX-1477Z-2126-SM-5Q5CM 60-69 years, male 23.4
GTEX-13VXT-2026-SM-5L3EW 20-29 years, female 23.3
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 23.1
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 22.6
GTEX-ZAJG-2626-SM-5S2NU 50-59 years, female 22.6
GTEX-13PVQ-2726-SM-5L3H7 50-59 years, male 22.4
GTEX-11TUW-2326-SM-5EQMO 60-69 years, male 22.3
Show all
Colon - Transverse
RPKM: 12.3
Samples: 196

Max RPKM: 22.7
Min RPKM: 6.7
Std RPKM: 3.6
Median RPKM: 11.2
GTEX-148VJ-2626-SM-5QGPI 70-79 years, male 22.7
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 22.6
GTEX-S341-1426-SM-4AD6U 40-49 years, female 20.9
GTEX-11O72-2226-SM-5PNW2 40-49 years, male 20.8
GTEX-11TTK-2426-SM-5PNYO 60-69 years, female 20.2
GTEX-Y114-1526-SM-4TT79 50-59 years, female 20.2
GTEX-111YS-1626-SM-5GZZ9 60-69 years, male 19.4
GTEX-11P81-1126-SM-5GU5G 30-39 years, female 19.4
GTEX-13O3O-2526-SM-5L3DR 60-69 years, female 19.3
GTEX-ZYFC-2626-SM-5NQ6S 50-59 years, male 19.2
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

41.1

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 41.1
FF:10014-101C5 62,83,84 years, mixed 41.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.