Tissue expression of CCDC88C - Staining in adipose tissue

SOFT TISSUE - Expression summary

Protein expression

RNA expression

HPA:	4.1	TPM
GTEx:	2.7	RPKM
FANTOM5:	4.9	Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Medium
Fibroblasts:	Medium
Peripheral nerve:	Medium

Antibody staining	Antibody HPA005832
Adipocytes	Medium
Fibroblasts	Medium
Peripheral nerve	Medium

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Medium
Fibroblasts:	Medium
Peripheral nerve:	Medium

Antibody staining	Antibody HPA005832
Adipocytes	Medium
Fibroblasts	Medium
Peripheral nerve	Medium

ADIPOSE TISSUE - HPA RNA-seq

Average TPM	4.1

Female, age 80

Sample 1
TPM: 7.6

Cell types%

Adipocytes: 95
Other cell types: 5

Female, age 45

Sample 2
TPM: 2.8

Female, age 57

Sample 3
TPM: 3.8

Cell types%

Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5

Female, age 74

Sample 4
TPM: 3.8

Cell types%

Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5

Female, age 59

Sample 5
TPM: 2.6

Cell types%

Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM	2.7

GTEx sample id

Sample description

RPKM

Adipose - Subcutaneous
RPKM: 2.8

Samples: 350

Max RPKM: 7.6
Min RPKM: 0.6
Std RPKM: 1.1
Median RPKM: 2.7

GTEX-11WQC-2426-SM-5EQKQ

60-69 years, male

7.6

GTEX-11P81-2426-SM-5GU65

30-39 years, female

6.2

GTEX-1399T-2726-SM-5K7XK

60-69 years, male

6.2

GTEX-ZYFC-0326-SM-5NQ7H

50-59 years, male

5.7

GTEX-S7SE-0226-SM-2XCD4

50-59 years, male

5.6

GTEX-12WSC-0226-SM-5EQ52

50-59 years, male

5.5

GTEX-13PDP-0226-SM-5K7W9

60-69 years, male

5.5

GTEX-13VXU-0226-SM-5SI9R

50-59 years, male

5.4

GTEX-QV44-1825-SM-447CF

50-59 years, male

5.4

GTEX-ZE7O-0226-SM-5S2N1

50-59 years, female

5.4

Show all

Adipose - Visceral (Omentum)
RPKM: 2.6

Samples: 227

Max RPKM: 10.2
Min RPKM: 0.7
Std RPKM: 1.4
Median RPKM: 2.4

GTEX-14A6H-1026-SM-5SIAZ

30-39 years, male

10.2

GTEX-132Q8-1726-SM-5EGK8

60-69 years, male

8.7

GTEX-1313W-1626-SM-5J1OE

50-59 years, female

8.1

GTEX-ZE7O-1526-SM-5J1NH

50-59 years, female

7.6

GTEX-ZXG5-1626-SM-59HJK

60-69 years, male

6.7

GTEX-ZYFC-1826-SM-5GZZA

50-59 years, male

6.2

GTEX-11OF3-0826-SM-5BC51

60-69 years, male

5.6

GTEX-13VXU-1026-SM-5KLZE

50-59 years, male

5.3

GTEX-12WSA-1626-SM-5EGJV

60-69 years, male

5.2

GTEX-12ZZX-1726-SM-5BC63

40-49 years, female

5.2

Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million	4.9

FANTOM5 sample id

Sample description

Tags Per Million

Adipose tissue
Tags Per Million: 4.9

FF:10010-101C1

65,65,76 years, mixed

4.9