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CLCA1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:713.1TPM
GTEx:89.7RPKM
FANTOM5:639.4Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:High
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA052787

  

Antibody HPA059301

  

Endothelial cells

 Not detected   Not detected  

Glandular cells

 High   High  

Peripheral nerve/ganglion

 Not detected   Not detected  
   
   
   

COLON - HPA RNA-seq

Average TPM

713.1
overview Male, age 54 Sample 1
TPM: 1173.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 332.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 1187.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 135.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 425.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 242.8
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 1031.5
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 535
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 789.3
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 1087
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 1452.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 350.7
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 527.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

89.7

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 1.7
Samples: 149

Max RPKM: 34.7
Min RPKM: 0.0
Std RPKM: 5.1
Median RPKM: 0.1
GTEX-Y5LM-1426-SM-5RQJL 40-49 years, female 34.7
GTEX-YJ8A-1726-SM-5P9IQ 20-29 years, male 30.1
GTEX-YEC3-2026-SM-4WWFL 50-59 years, male 25.2
GTEX-XBED-1726-SM-47JYO 60-69 years, male 25.0
GTEX-13U4I-2626-SM-5SI9C 40-49 years, female 14.5
GTEX-117YX-0526-SM-5EGJH 50-59 years, male 13.3
GTEX-V955-1726-SM-4JBHF 60-69 years, male 12.9
GTEX-11EQ9-1526-SM-5PNY7 30-39 years, male 11.5
GTEX-146FH-2426-SM-5Q5EW 50-59 years, female 8.5
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 7.0
Show all
Colon - Transverse
RPKM: 156.5
Samples: 196

Max RPKM: 655.1
Min RPKM: 0.0
Std RPKM: 152.8
Median RPKM: 130.8
GTEX-U4B1-1126-SM-4DXV3 40-49 years, male 655.1
GTEX-YB5E-1626-SM-5IFIQ 40-49 years, male 627.4
GTEX-PWOO-1326-SM-48TCJ 40-49 years, female 617.4
GTEX-XUJ4-2026-SM-4BOOW 60-69 years, female 567.9
GTEX-133LE-1526-SM-5IFEN 20-29 years, female 554.3
GTEX-117YW-1826-SM-5PNY5 50-59 years, male 547.9
GTEX-S4Q7-0826-SM-4AD5E 20-29 years, male 524.4
GTEX-YF7O-1726-SM-5IFJ9 50-59 years, male 476.8
GTEX-WFG7-1526-SM-4LVMG 20-29 years, male 467.8
GTEX-13O21-2426-SM-5MR4A 50-59 years, male 446.1
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

639.4

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 639.4
FF:10014-101C5 62,83,84 years, mixed 639.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.