Tissue expression of DEF6 - Staining in stomach

STOMACH - Expression summary

Protein expression

RNA expression

HPA:	15.2	TPM
GTEx:	9.0	RPKM

STOMACH 1 - Annotated protein expression

Annotated protein
expression

Glandular cells:

Low

Antibody staining	Antibody HPA038975	Antibody HPA038976
Glandular cells	Medium	Low

STOMACH 2 - Annotated protein expression

Annotated protein
expression

Glandular cells:

Low

Antibody staining	Antibody HPA038975	Antibody HPA038976
Glandular cells	Medium	Medium

STOMACH - HPA RNA-seq

Average TPM	15.2

Female, age 33

Sample 1
TPM: 16.1

Cell types%

Glandular cells: 60
Smooth muscle cells: 5
Other cell types: 35

Male, age 82

Sample 2
TPM: 13

Cell types%

Glandular cells: 65
Smooth muscle cells: 5
Other cell types: 30

Male, age 71

Sample 3
TPM: 24.2

Cell types%

Glandular cells: 50
Smooth muscle cells: 5
Other cell types: 45

Female, age 66

Sample 4
TPM: 7.7

Cell types%

Glandular cells: 50
Smooth muscle cells: 10
Other cell types: 40

STOMACH - GTEx RNA-seq

Average RPKM	9.0

GTEx sample id

Sample description

RPKM

Stomach
RPKM: 9.0

Samples: 193

Max RPKM: 26.1
Min RPKM: 0.7
Std RPKM: 5.1
Median RPKM: 9.9

GTEX-13U4I-2526-SM-5SI8Z

40-49 years, female

26.1

GTEX-WFG8-1326-SM-4LVN3

20-29 years, male

22.0

GTEX-13PVQ-2126-SM-5L3FW

50-59 years, male

21.8

GTEX-P78B-1826-SM-3P5YX

40-49 years, female

21.4

GTEX-ZAB4-1526-SM-5CVN7

40-49 years, male

20.1

GTEX-POMQ-0826-SM-3P61H

20-29 years, female

19.2

GTEX-ZVT3-2126-SM-59HL2

60-69 years, female

19.0

GTEX-13S7M-1826-SM-5RQK6

60-69 years, female

18.3

GTEX-12696-1726-SM-5EQLH

60-69 years, male

17.8

GTEX-WHPG-0426-SM-4M1XW

50-59 years, male

16.6

Show all

STOMACH - FANTOM5 CAGE
No Fantom CAGE analysis found for this gene / tissue