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NCAPH2

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:16.5TPM
GTEx:14.9RPKM
FANTOM5:12.9Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glandular cells:High
 

Antibody staining

Antibody HPA069056

  

Endothelial cells

 Low  

Glandular cells

 High  
 
 
 

COLON - HPA RNA-seq

Average TPM

16.5
overview Male, age 54 Sample 1
TPM: 17.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 13.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 14.9
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 15.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 12.2
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 19.6
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 14.3
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 13.8
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 16.4
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 20.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 18.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 19.1
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 18.7
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

14.9

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 15.6
Samples: 149

Max RPKM: 22.8
Min RPKM: 10.1
Std RPKM: 2.4
Median RPKM: 15.5
GTEX-13OW6-2226-SM-5N9FL 50-59 years, male 22.8
GTEX-ZPCL-1626-SM-57WGC 60-69 years, female 21.8
GTEX-ZTTD-2626-SM-57WEX 50-59 years, male 21.8
GTEX-13PL7-2426-SM-5J2N3 60-69 years, female 21.4
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 20.9
GTEX-WQUQ-2626-SM-4MVNP 60-69 years, male 20.9
GTEX-139TS-2226-SM-5J2N1 60-69 years, male 20.6
GTEX-145MH-2726-SM-5QGQ6 50-59 years, male 20.5
GTEX-1477Z-2126-SM-5Q5CM 60-69 years, male 20.5
GTEX-11DXY-2026-SM-5N9CZ 60-69 years, male 20.1
Show all
Colon - Transverse
RPKM: 14.3
Samples: 196

Max RPKM: 23.7
Min RPKM: 8.3
Std RPKM: 2.3
Median RPKM: 14.3
GTEX-11WQK-2126-SM-5EQME 50-59 years, male 23.7
GTEX-WQUQ-2526-SM-4MVNO 60-69 years, male 21.9
GTEX-13OVI-2026-SM-5J1MU 60-69 years, female 20.2
GTEX-PWOO-1326-SM-48TCJ 40-49 years, female 19.6
GTEX-X15G-1326-SM-4PQZJ 50-59 years, female 19.2
GTEX-SNOS-1226-SM-4DM5H 40-49 years, male 19.1
GTEX-QMRM-1226-SM-447C6 50-59 years, male 19.0
GTEX-13OW6-2126-SM-5N9GL 50-59 years, male 18.9
GTEX-P78B-1726-SM-3P5ZV 40-49 years, female 18.4
GTEX-R53T-1326-SM-48FCQ 50-59 years, female 18.2
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

12.9

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 12.9
FF:10014-101C5 62,83,84 years, mixed 12.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.