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IFNGR1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:71.1TPM
GTEx:29.2RPKM
FANTOM5:123.9Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA063871

  

Endothelial cells

 Not detected  

Glandular cells

 Not detected  

Peripheral nerve/ganglion

 Not detected  
 
 
 

COLON - HPA RNA-seq

Average TPM

71.1
overview Male, age 54 Sample 1
TPM: 71.5
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 78.3
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 55.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 76.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 75.4
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 53.4
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 77.9
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 76.9
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 66.2
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 69
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 89.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 67.2
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 66.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

29.2

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 23.3
Samples: 149

Max RPKM: 71.3
Min RPKM: 11.8
Std RPKM: 7.1
Median RPKM: 21.8
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 71.3
GTEX-ZAB4-2426-SM-5HL8A 40-49 years, male 46.2
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 45.7
GTEX-14E6C-2226-SM-5QGQG 40-49 years, male 40.1
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 37.8
GTEX-14C39-1626-SM-5S2P4 40-49 years, male 36.8
GTEX-WFON-1326-SM-4LVMN 40-49 years, male 36.5
GTEX-1477Z-2126-SM-5Q5CM 60-69 years, male 36.1
GTEX-13SLW-2826-SM-5Q5ES 70-79 years, male 35.3
GTEX-12ZZW-2426-SM-5DUWE 50-59 years, male 34.3
Show all
Colon - Transverse
RPKM: 33.6
Samples: 196

Max RPKM: 98.7
Min RPKM: 13.5
Std RPKM: 11.6
Median RPKM: 32.0
GTEX-14C38-2626-SM-5RQI4 50-59 years, male 98.7
GTEX-144GM-1226-SM-5LU52 20-29 years, male 77.7
GTEX-13OVG-1426-SM-5K7VP 60-69 years, male 70.3
GTEX-ZXES-1626-SM-5NQ7L 30-39 years, female 65.7
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 58.9
GTEX-132AR-2726-SM-5PNVN 50-59 years, female 57.7
GTEX-1122O-1526-SM-5N9CL 60-69 years, female 55.8
GTEX-11P82-1026-SM-5BC5J 20-29 years, male 55.8
GTEX-ZVT2-1926-SM-5GU5T 50-59 years, female 53.5
GTEX-14E6E-1526-SM-5RQIG 30-39 years, male 53.2
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

123.9

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 123.9
FF:10014-101C5 62,83,84 years, mixed 123.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.