Tissue expression of PNPLA6 - Staining in small intestine

SMALL INTESTINE - Expression summary

Protein expression

RNA expression

HPA:	32.4	TPM
GTEx:	26.0	RPKM
FANTOM5:	40.2	Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:

Medium

Antibody staining	Antibody HPA007522
Glandular cells	Medium

SMALL INTESTINE - HPA RNA-seq

Average TPM	32.4

Male, age 65

Sample 1
TPM: 25.7

Cell types%

Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40

Male, age 39

Sample 2
TPM: 45.4

Cell types%

Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55

Male, age 68

Sample 3
TPM: 28.7

Cell types%

Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55

Male, age 85

Sample 4
TPM: 29.9

SMALL INTESTINE - GTEx RNA-seq

Average RPKM	26.0

GTEx sample id

Sample description

RPKM

Small Intestine - Terminal Ileum
RPKM: 26.0

Samples: 88

Max RPKM: 52.1
Min RPKM: 14.2
Std RPKM: 6.2
Median RPKM: 25.7

GTEX-VUSG-1726-SM-4KKZL

50-59 years, male

52.1

GTEX-UPK5-2026-SM-4JBIM

40-49 years, male

44.4

GTEX-XAJ8-0526-SM-47JYK

40-49 years, male

38.5

GTEX-131XG-1726-SM-5LZUR

50-59 years, female

38.1

GTEX-WQUQ-2426-SM-4MVNW

60-69 years, male

35.9

GTEX-ZTSS-0926-SM-59865

40-49 years, male

34.5

GTEX-Z9EW-0926-SM-5CVMM

40-49 years, male

33.1

GTEX-11NSD-1726-SM-5N9C3

20-29 years, male

33.0

GTEX-11DXX-1626-SM-5H11H

60-69 years, female

32.9

GTEX-WH7G-1626-SM-4LVMY

40-49 years, male

32.9

Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million	40.2

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 40.2

FF:10024-101D6

15,40,85 years, mixed

40.2