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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
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MRI1
  • TISSUE

  • premium

    CELL

  • PATHOLOGY

PATHOLOGY ATLAS

GENE/PROTEIN

Antibody validation

Dictionary

Level of antibody staining/expression





High
Medium
Low
Not detected

GENERAL INFORMATION

Gene name

MRI1

Gene description

Methylthioribose-1-phosphate isomerase 1

Protein class

Enzymes
Predicted intracellular proteins

Predicted localization

Intracellular

Number of transcripts

2
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HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):Expressed in all
HPA (cell line):Mixed
HPA (normal tissue):Expressed in all

Protein evidence

Evidence at protein level

Protein expression
normal tissue

General cytoplasmic and nuclear expression.

ANTIBODY IHC RELIABILITY

Data reliability
description

Antibody staining mainly consistent with RNA expression data. Pending external verification.

Reliability score

Approved based on 2 antibodies.
HPA042744 , CAB045988
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PROGNOSTIC SUMMARY

Gene product is not prognostic.
Show all

RNA EXPRESSION OVERVIEW

TCGA dataset
RNA cancer category: Expressed in all

PROTEIN EXPRESSION

Colorectal cancer
Breast cancer
Prostate cancer
Lung cancer
Liver cancer

STAINING SUMMARY

HPA042744
CAB045988

Cancer

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 

Cancer

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

Several cases of melanoma, lymphoma, colorectal, breast, prostate and ovarian displayed moderate cytoplasmic and nuclear positivity. Remaining cancer tissues were weakly stained or negative.

Cancer

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 

Cancer

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

Cancer tissues showed moderate to strong granular cytoplasmic and nuclear staining. Most testicular and several liver cancers were negative.

GENE INFORMATION

Gene name

MRI1 (HGNC Symbol)

Synonyms

MGC3207, MRDI, mtnA, Ypr118w

Description

Methylthioribose-1-phosphate isomerase 1 (HGNC Symbol)

Entrez gene summary

Chromosome

19

Cytoband

p13.13

Chromosome location (bp)

13764532 - 13774282

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000037757 (version 83.38)

Entrez gene

84245

UniProt

Q9BV20 (UniProt - Evidence at protein level)

neXtProt

NX_Q9BV20

Antibodypedia

MRI1 antibodies

PROTEIN BROWSER

MRI1-001
MRI1-002

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

MRI1-001
ENSP00000314871
ENST00000319545
Q9BV20 [Direct mapping]
Methylthioribose-1-phosphate isomerase
Show all
Enzymes
   ENZYME proteins
   Isomerase
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000096 [sulfur amino acid metabolic process]
GO:0005730 [nucleolus]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0006595 [polyamine metabolic process]
GO:0019284 [L-methionine biosynthetic process from S-adenosylmethionine]
GO:0019509 [L-methionine biosynthetic process from methylthioadenosine]
GO:0034641 [cellular nitrogen compound metabolic process]
GO:0042802 [identical protein binding]
GO:0042995 [cell projection]
GO:0044237 [cellular metabolic process]
GO:0044249 [cellular biosynthetic process]
GO:0044281 [small molecule metabolic process]
GO:0046523 [S-methyl-5-thioribose-1-phosphate isomerase activity]
Show all
322 aa
34.5 kDa
No 0
MRI1-002
ENSP00000040663
ENST00000040663
Q9BV20 [Direct mapping]
Methylthioribose-1-phosphate isomerase
Show all
Enzymes
   ENZYME proteins
   Isomerase
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000096 [sulfur amino acid metabolic process]
GO:0005730 [nucleolus]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0006595 [polyamine metabolic process]
GO:0019284 [L-methionine biosynthetic process from S-adenosylmethionine]
GO:0019509 [L-methionine biosynthetic process from methylthioadenosine]
GO:0034641 [cellular nitrogen compound metabolic process]
GO:0042802 [identical protein binding]
GO:0042995 [cell projection]
GO:0044237 [cellular metabolic process]
GO:0044249 [cellular biosynthetic process]
GO:0044281 [small molecule metabolic process]
GO:0046523 [S-methyl-5-thioribose-1-phosphate isomerase activity]
Show all
369 aa
39.1 kDa
No 0

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