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ANTIBODY INFORMATION VALIDATION SUMMARY IMMUNOCYTOCHEMISTRY IMMUNOHISTOCHEMISTRY WESTERN BLOT PROTEIN ARRAY ANTIGEN INFORMATION RELEVANT PUBLICATIONS

ANTIBODY INFORMATION

 
 

Antibody HPA004812

 

Antibody CAB000087

 

Antibody CAB028364

 

Antibody CAB072855

 

Antibody CAB072856

 

Antibody CAB072857

 

Provider

Atlas Antibodies
Sigma-Aldrich
  Zymed
  ECM Biosciences
  Atlas Antibodies
Sigma-Aldrich
  Atlas Antibodies
Sigma-Aldrich
  Atlas Antibodies
Sigma-Aldrich
 

Product name

HPA004812   13-1700   CM1681   AMAb90862   AMAb90863   AMAb90865  

Host species

Rabbit   Mouse   Mouse   Mouse   Mouse   Mouse  

Clonality

pAb   mAb   mAb   mAb   mAb   mAb  

Purity

Affinity purified using the PrEST-antigen as affinity ligand   Not known   Protein A/G   Protein A/G   Protein A/G   Protein A/G  

Other gene match

           

Released in version

3   1   6   14   14   14  

References

           

Proper citation

Atlas Antibodies Cat#HPA004812, RRID:AB_1078369     ECM Biosciences Cat#CM1681, RRID:AB_2076812   Atlas Antibodies Cat#AMAb90862, RRID:AB_2665698   Atlas Antibodies Cat#AMAb90863, RRID:AB_2665699   Atlas Antibodies Cat#AMAb90865, RRID:AB_2665700  

VALIDATION SUMMARY

 
 

Antibody HPA004812

 

Antibody CAB000087

 

Antibody CAB028364

 

Antibody CAB072855

 

Antibody CAB072856

 

Antibody CAB072857

 
Immunocytochemistry

    Supported        
Immunohistochemistry


Validated
 

Validated
 

Validated
 

Validated
 

Validated
 

Validated
 
Western blot

Uncertain   Supported   Uncertain   Supported   Supported   Supported  
Protein array

Supported            

IMMUNOCYTOCHEMISTRY

 
 

Antibody HPA004812

 

Antibody CAB000087

 

Antibody CAB028364

 

Antibody CAB072855

 

Antibody CAB072856

 

Antibody CAB072857

 

Standard validation

    Supported        

           

Figure description

    Immunofluorescent staining of human cell line A-431 shows localization to plasma membrane, the Golgi apparatus & cell junctions.        

Antibody dilution

    1:112        

Literature conformity

    The subcellular location is supported by literature.        

IMMUNOHISTOCHEMISTRY

 
 

Antibody HPA004812

 

Antibody CAB000087

 

Antibody CAB028364

 

Antibody CAB072855

 

Antibody CAB072856

 

Antibody CAB072857

 

Formal validation: Orthogonal

Validated

Pearson correlation >0.6 for protein and RNA expression in cell lines.
   
Validated

Pearson correlation >0.6 for protein and RNA expression in cell lines.
 
Validated

Pearson correlation >0.6 for protein and RNA expression in cell lines.
 
Validated

Pearson correlation >0.6 for protein and RNA expression in cell lines.
 
Validated

Pearson correlation >0.6 for protein and RNA expression in cell lines.
 

   
 
 
 
 

Figure description

Distribution of protein expression (antibody staining) and RNA expression (TPM) across 44 cell lines.     Distribution of protein expression (antibody staining) and RNA expression (TPM) across 44 cell lines.   Distribution of protein expression (antibody staining) and RNA expression (TPM) across 44 cell lines.   Distribution of protein expression (antibody staining) and RNA expression (TPM) across 44 cell lines.   Distribution of protein expression (antibody staining) and RNA expression (TPM) across 44 cell lines.  
 

Formal validation: Orthogonal

Validated

Spearman correlation >0.6 for protein and RNA expression in tissues.
 
Validated

Spearman correlation >0.6 for protein and RNA expression in tissues.
 
Validated

Spearman correlation >0.6 for protein and RNA expression in tissues.
 
Validated

Spearman correlation >0.6 for protein and RNA expression in tissues.
 
Validated

Spearman correlation >0.6 for protein and RNA expression in tissues.
 
Validated

Spearman correlation >0.6 for protein and RNA expression in tissues.
 

 
 
 
 
 
 

Figure description

Distribution of protein expression (antibody staining) and RNA expression (TPM) across 37 tissues.   Distribution of protein expression (antibody staining) and RNA expression (TPM) across 37 tissues.   Distribution of protein expression (antibody staining) and RNA expression (TPM) across 37 tissues.   Distribution of protein expression (antibody staining) and RNA expression (TPM) across 37 tissues.   Distribution of protein expression (antibody staining) and RNA expression (TPM) across 37 tissues.   Distribution of protein expression (antibody staining) and RNA expression (TPM) across 37 tissues.  
 

Standard validation

Supported   Supported   Supported   Supported   Supported   Supported  

           

Figure description

Immunohistochemical staining of human kidney shows membranous positivity in distal tubules.   Immunohistochemical staining of human duodenum shows strong membranous positivity in glandular cells.   Immunohistochemical staining of human prostate shows strong membranous and cytoplasmic positivity in glandular cells.   Immunohistochemical staining of human stomach shows membranous positivity in glandular cells.   Immunohistochemical staining of human esophagus shows strong membranous positivity in squamous epithelial cells.   Immunohistochemical staining of human stomach shows membranous positivity in glandular cells.  

Expression

RNA: detected in 33 tissues
Protein: detected in 41 cell types
  RNA: detected in 33 tissues
Protein: detected in 37 cell types
  RNA: detected in 33 tissues
Protein: detected in 43 cell types
  RNA: detected in 33 tissues
Protein: detected in 40 cell types
  RNA: detected in 33 tissues
Protein: detected in 39 cell types
  RNA: detected in 33 tissues
Protein: detected in 36 cell types
 

Retrieval

HIER pH6   HIER pH6   HIER pH6   HIER pH6   HIER pH6   HIER pH6  

Antibody dilution

1:300   1:10000   1:450   1:750   1:1000   1:850  

Literature conformity

Consistent with extensive gene/protein characterization data.   Consistent with extensive gene/protein characterization data.   Consistent with extensive gene/protein characterization data.   Consistent with extensive gene/protein characterization data.   Consistent with extensive gene/protein characterization data.   Consistent with extensive gene/protein characterization data.  

RNA consistency

Consistent with RNA expression data.   Consistent with RNA expression data.   Consistent with RNA expression data.   Consistent with RNA expression data.   Consistent with RNA expression data.   Consistent with RNA expression data.  

WESTERN BLOT

 
 

Antibody HPA004812

 

Antibody CAB000087

 

Antibody CAB028364

 

Antibody CAB072855

 

Antibody CAB072856

 

Antibody CAB072857

 

Standard validation

Uncertain

Analysis performed using a standard panel of samples.
Single band larger than predicted size in kDa (+20%) but partly supported by experimental and/or bioinformatic data.
  Supported

Analysis performed using a standard panel of samples.
Single band corresponding to the predicted size in kDa (+/-20%).
  Uncertain

Analysis performed using a standard panel of samples.
Weak band of predicted size but with additional bands of higher intensity also present.
  Supported

Analysis performed using a standard panel of samples.
Band of predicted size in kDa (+/-20%) with additional bands present.
  Supported

Analysis performed using a standard panel of samples.
Band of predicted size in kDa (+/-20%) with additional bands present.
  Supported

Analysis performed using a standard panel of samples.
Band of predicted size in kDa (+/-20%) with additional bands present.
 

           

Figure description

Lane 1: Marker [kDa] 230, 110, 82, 49.3, 32.2, 25.5, 17.6
Lane 2: RT4
Lane 3: U-251 MG
Lane 4: Human Plasma
Lane 5: Liver
Lane 6: Tonsil
  Lane 1: Marker [kDa] 250, 130, 95, 72, 55, 36, 28, 17, 11
Lane 2: RT4
Lane 3: U-251 MG
Lane 4: Human Plasma
Lane 5: Liver
Lane 6: Tonsil
    Lane 1: Marker [kDa] 250, 130, 95, 72, 55, 36, 28, 17, 10
Lane 2: RT4
Lane 3: U-251 MG
Lane 4: Human Plasma
Lane 5: Liver
Lane 6: Tonsil
  Lane 1: Marker [kDa] 250, 130, 95, 72, 55, 36, 28, 17, 10
Lane 2: RT4
Lane 3: U-251 MG
Lane 4: Human Plasma
Lane 5: Liver
Lane 6: Tonsil
  Lane 1: Marker [kDa] 250, 130, 95, 72, 55, 36, 28, 17, 10
Lane 2: RT4
Lane 3: U-251 MG
Lane 4: Human Plasma
Lane 5: Liver
Lane 6: Tonsil
 

Target mass (kDa)

100, 97.5, 90.9   100, 97.5, 90.9, 71.4, 71.3   100, 97.5, 90.9, 71.4, 71.3   100, 97.5, 90.9, 71.4, 71.3   100, 97.5, 90.9, 71.4, 71.3   100, 97.5, 90.9, 71.4, 71.3  

Antibody dilution

1:250   1:500   1:500   1:500   1:500   1:500  

PROTEIN ARRAY

 
 

Antibody HPA004812

 

Antibody CAB000087

 

Antibody CAB028364

 

Antibody CAB072855

 

Antibody CAB072856

 

Antibody CAB072857

 

Standard validation

Supported

Pass with single peak corresponding to interaction only with its own antigen.
           

           

Figure description

Antibody specificity analysis with protein arrays. Predicted and matching interactions are shown in green.            

Antibody dilution

1:3000            

ANTIGEN INFORMATION

 
 

Antibody HPA004812

 

Antibody CAB000087

 

Antibody CAB028364

 

Antibody CAB072855

 

Antibody CAB072856

 

Antibody CAB072857

 

Antigen

Recombinant protein fragment   Not known   Recombinant protein   Recombinant protein   Recombinant protein   Recombinant protein  

Length (aa)

125            

Antigen sequence

ATDNGSPVATGTGTLLLILSDVNDNAPIPEPRTIFFCERNPKPQVINIID
ADLPPNTSPFTAELTHGASANWTIQYNDPTQESIILKPKMALEVGDYKIN
LKLMDNQNKDQVTTLEVSVCDCEGA
           

Matching transcripts

CDH1-001 - ENSP00000261769 [100%]
CDH1-004 - ENSP00000414946 [100%]
CDH1-201 - ENSP00000481063 [100%]
           

Other gene match

           
ANTIGEN VIEW
CDH1-001
CDH1-004
CDH1-201
 

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