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PSMA4

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:94.5TPM
GTEx:33.6RPKM
FANTOM5:73.9Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Chondrocytes:Not available
Fibroblasts:Not detected
Peripheral nerve:Low
 

Antibody staining

Antibody HPA055466

  

Antibody HPA060613

  

Antibody CAB004973

  

Adipocytes

 Not detected   Not detected   Not detected  

Chondrocytes

 Medium   High  

Fibroblasts

 Not detected   Low   Not detected  

Peripheral nerve

 Low  
     
     
     

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Low
 

Antibody staining

Antibody HPA055466

  

Antibody HPA060613

  

Antibody CAB004973

  

Adipocytes

 Not detected   Not detected   Not detected  

Fibroblasts

 Not detected   Low   Not detected  

Peripheral nerve

 Not detected   Medium   Low  
     
     
     

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

94.5
N/A Female, age 80 Sample 1
TPM: 92.5
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 82.8
N/A Female, age 57 Sample 3
TPM: 82.3
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 135
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 80
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

33.6

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 34.6
Samples: 350

Max RPKM: 57.4
Min RPKM: 21.0
Std RPKM: 5.9
Median RPKM: 33.7
GTEX-Y5V6-2526-SM-5IFJV 60-69 years, male 57.4
GTEX-Y3IK-2526-SM-4WWDM 50-59 years, female 56.7
GTEX-POMQ-2326-SM-5S2VS 20-29 years, female 54.3
GTEX-14BMV-0226-SM-5S2N2 50-59 years, male 53.0
GTEX-T5JW-1726-SM-3GADN 20-29 years, female 51.6
GTEX-NPJ8-0226-SM-48TBN 40-49 years, male 51.0
GTEX-X88G-0226-SM-4GIE4 30-39 years, male 49.9
GTEX-13G51-2626-SM-5LZYW 60-69 years, male 48.1
GTEX-ZYVF-0226-SM-5GIEG 50-59 years, female 47.2
GTEX-WFJO-1926-SM-3GILA 30-39 years, male 46.6
Show all
Adipose - Visceral (Omentum)
RPKM: 32.2
Samples: 227

Max RPKM: 77.3
Min RPKM: 20.9
Std RPKM: 7.0
Median RPKM: 31.4
GTEX-13X6H-1726-SM-5Q5EH 50-59 years, female 77.3
GTEX-Y5LM-0826-SM-4VDSW 40-49 years, female 59.6
GTEX-1399S-1426-SM-5PNYQ 30-39 years, female 54.0
GTEX-1128S-0926-SM-5GZZU 60-69 years, female 53.5
GTEX-132QS-0826-SM-5K7WV 60-69 years, male 51.3
GTEX-1339X-0726-SM-5L3FF 40-49 years, male 48.8
GTEX-1122O-0926-SM-5N9C9 60-69 years, female 48.4
GTEX-11WQK-1526-SM-5EGKN 50-59 years, male 47.5
GTEX-YJ89-1926-SM-5IFJ6 60-69 years, male 46.8
GTEX-ZZPU-0326-SM-5N9BJ 50-59 years, female 46.5
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

73.9

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 73.9
FF:10010-101C1 65,65,76 years, mixed 73.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.