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PSMA4
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    TISSUE

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    CELL

  • PATHOLOGY

TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:90.8TPM
GTEx:21.7RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glial cells:Low
Neuronal cells:Low
Neuropil:Low
 

Antibody staining

Antibody HPA055466

 

Antibody HPA060613

 

Antibody CAB004973

 

Endothelial cells

Medium   Medium   Low  

Glial cells

Low   Not detected   Low  

Neuronal cells

High   Medium   Low  

Neuropil

Medium   Low   Low  
     
     
     

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

90.8

N/A Male, age 5 Sample 1
TPM: 93.5
overview Female, age 40 Sample 2
TPM: 89.8
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70 Sample 3
TPM: 89
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

21.7

GTEx sample id

Sample description

RPKM

Brain - Cortex
RPKM: 21.1
Samples: 114

Max RPKM: 33.0
Min RPKM: 9.4
Std RPKM: 4.3
Median RPKM: 21.6
GTEX-UTHO-3026-SM-3GAFB 60-69 years, male 33.0
GTEX-PVOW-2526-SM-2XCF7 40-49 years, male 31.7
GTEX-QMR6-1426-SM-32PLA 50-59 years, male 29.8
GTEX-11DXY-3226-SM-5GIDE 60-69 years, male 27.4
GTEX-14BMV-3026-SM-5S2PQ 50-59 years, male 27.4
GTEX-13SLX-3126-SM-5S2Q5 50-59 years, female 27.2
GTEX-WVLH-3026-SM-3MJG9 50-59 years, male 27.1
GTEX-WZTO-2926-SM-3NM9I 40-49 years, male 26.9
GTEX-13FLW-1426-SM-5K7YE 50-59 years, male 26.7
GTEX-QDT8-2926-SM-32PKC 30-39 years, female 26.7
GTEX-XLM4-3026-SM-4AT6L 60-69 years, male 26.4
GTEX-13FHO-3026-SM-5J1O9 60-69 years, male 26.0
GTEX-145MH-3026-SM-5Q5DZ 50-59 years, male 26.0
GTEX-TSE9-3026-SM-3DB76 60-69 years, female 25.5
GTEX-ZAK1-3026-SM-5S2MJ 50-59 years, female 25.4
GTEX-13FXS-3126-SM-5J2NN 50-59 years, male 25.2
GTEX-11OF3-2926-SM-5HL78 60-69 years, male 25.1
GTEX-RNOR-2326-SM-2TF4I 50-59 years, female 25.1
GTEX-13OW6-3026-SM-5J2MI 50-59 years, male 24.7
GTEX-ZUA1-3026-SM-59HJC 40-49 years, male 24.5
GTEX-12WSC-3026-SM-5GCNF 50-59 years, male 24.4
GTEX-145MG-3026-SM-5RQJA 50-59 years, male 24.4
GTEX-14ASI-3026-SM-5S2PN 60-69 years, male 24.4
GTEX-T6MN-2626-SM-32PMQ 50-59 years, male 24.3
GTEX-1192X-3126-SM-5N9BY 50-59 years, male 24.2
GTEX-11DXW-1126-SM-5H12Q 40-49 years, male 24.2
GTEX-117XS-3026-SM-5N9CA 60-69 years, male 24.1
GTEX-13NYC-2826-SM-5K7WR 60-69 years, male 24.1
GTEX-13VXU-2926-SM-5LU5C 50-59 years, male 24.1
GTEX-QVUS-2826-SM-3GADB 60-69 years, female 24.1
GTEX-T2IS-3026-SM-32QPM 20-29 years, female 23.8
GTEX-YJ89-3026-SM-5IFJI 60-69 years, male 23.8
GTEX-ZYFD-3026-SM-5E44C 50-59 years, male 23.8
GTEX-131YS-3126-SM-5KLYT 60-69 years, female 23.7
GTEX-13NYS-3126-SM-5KLYV 60-69 years, male 23.7
GTEX-QVJO-1426-SM-2S1QY 60-69 years, female 23.7
GTEX-12ZZX-2926-SM-5GCOQ 40-49 years, female 23.6
GTEX-WHSE-3026-SM-3P5ZH 20-29 years, male 23.6
GTEX-12ZZY-3026-SM-5GCOU 60-69 years, male 23.5
GTEX-WL46-2926-SM-3LK82 50-59 years, male 23.5
GTEX-Y8DK-0826-SM-4TT3T 60-69 years, male 23.5
GTEX-12ZZZ-3026-SM-5BC67 60-69 years, male 23.4
GTEX-13OVH-3026-SM-5MR4N 70-79 years, male 23.3
GTEX-145LS-3126-SM-5Q5BY 60-69 years, female 22.9
GTEX-11GSO-2926-SM-5HL73 60-69 years, male 22.6
GTEX-11NUK-2926-SM-5A5MD 50-59 years, male 22.6
GTEX-X4XX-3026-SM-3NMB2 60-69 years, male 22.4
GTEX-WWYW-3126-SM-3NB39 50-59 years, female 22.3
GTEX-X585-3026-SM-46MWF 50-59 years, male 22.2
GTEX-YFC4-3126-SM-5PNV6 40-49 years, female 22.2
GTEX-11PRG-2926-SM-5987A 50-59 years, male 22.0
GTEX-XOTO-3026-SM-4B65M 50-59 years, male 22.0
GTEX-ZVT3-3026-SM-5E43N 60-69 years, female 21.9
GTEX-111FC-3126-SM-5GZZ2 60-69 years, male 21.7
GTEX-1313W-3126-SM-5LZUI 50-59 years, female 21.7
GTEX-132Q8-3026-SM-5PNVG 60-69 years, male 21.7
GTEX-13NYB-3026-SM-5IJD7 40-49 years, male 21.7
GTEX-13O3O-3126-SM-5KM3H 60-69 years, female 21.5
GTEX-11OC5-0726-SM-5P9JK 60-69 years, male 21.2
GTEX-12126-1026-SM-5P9JJ 20-29 years, male 21.2
GTEX-11ONC-2926-SM-5P9JM 60-69 years, male 21.1
GTEX-1399T-3026-SM-5KLZC 60-69 years, male 20.9
GTEX-13QIC-2926-SM-5J2NF 60-69 years, female 20.9
GTEX-13OW8-2826-SM-5L3GC 60-69 years, male 20.8
GTEX-ZZPT-3026-SM-5GZXH 50-59 years, male 20.8
GTEX-144GL-3026-SM-5Q5CW 50-59 years, male 20.4
GTEX-1128S-2726-SM-5H12C 60-69 years, female 20.3
GTEX-T5JC-2426-SM-3NMDB 20-29 years, male 20.3
GTEX-145MF-2726-SM-5O995 50-59 years, male 20.2
GTEX-11O72-2926-SM-5BC4V 40-49 years, male 20.0
GTEX-13OVJ-2826-SM-5L3GW 50-59 years, female 20.0
GTEX-11GS4-3126-SM-5A5LH 60-69 years, male 19.9
GTEX-11ZUS-2926-SM-5FQSL 30-39 years, male 19.9
GTEX-13O3Q-2926-SM-5KM45 50-59 years, male 19.8
GTEX-11EI6-3026-SM-5GZZO 60-69 years, male 19.4
GTEX-12ZZW-2926-SM-5LZUP 50-59 years, male 19.3
GTEX-13X6J-3026-SM-5Q5CU 50-59 years, male 19.2
GTEX-NPJ8-1526-SM-2D7VU 40-49 years, male 18.9
GTEX-R55F-1326-SM-5S2V4 50-59 years, male 18.8
GTEX-ZE7O-3126-SM-5HL5X 50-59 years, female 18.8
GTEX-12WSH-3026-SM-5CVNI 50-59 years, male 18.7
GTEX-144FL-3026-SM-5O99C 50-59 years, male 18.7
GTEX-RU72-3026-SM-5SI7Y 50-59 years, female 18.7
GTEX-Y111-2726-SM-4TT3N 50-59 years, male 18.7
GTEX-Z93S-2926-SM-57WB9 50-59 years, male 18.6
GTEX-13PVQ-3026-SM-5SI93 50-59 years, male 18.5
GTEX-ZAJG-3126-SM-5HL9J 50-59 years, female 18.5
GTEX-13PL6-3126-SM-5LUAR 40-49 years, female 18.4
GTEX-13FHP-3026-SM-5IJBS 50-59 years, male 18.2
GTEX-13S7M-3126-SM-5RQJQ 60-69 years, female 18.2
GTEX-11WQK-3026-SM-5EQL6 50-59 years, male 18.0
GTEX-Q2AG-2926-SM-2HMJ3 40-49 years, female 17.7
GTEX-1117F-3226-SM-5N9CT 60-69 years, female 17.6
GTEX-OXRN-2426-SM-2I5EQ 50-59 years, male 17.6
GTEX-14A5I-2926-SM-5Q5CQ 50-59 years, female 17.0
GTEX-13G51-3026-SM-5IJB8 60-69 years, male 16.9
GTEX-13X6K-2926-SM-5Q5D5 60-69 years, female 16.8
GTEX-NPJ7-2726-SM-2I3FT 60-69 years, female 16.7
GTEX-N7MT-1126-SM-5SI7V 60-69 years, female 16.6
GTEX-13JVG-3126-SM-5L3FH 60-69 years, male 16.2
GTEX-139T8-1026-SM-5J2MC 60-69 years, male 15.7
GTEX-13OW7-3026-SM-5L3GY 50-59 years, male 15.4
GTEX-11EMC-3226-SM-5EGKW 60-69 years, female 14.8
GTEX-PWO3-0926-SM-2I5EY 60-69 years, female 14.7
GTEX-13JUV-2926-SM-5LZX7 40-49 years, female 14.0
GTEX-131XW-3126-SM-5LZUC 50-59 years, female 13.9
GTEX-12WSD-3126-SM-5HL7P 60-69 years, female 13.7
GTEX-12WSA-2926-SM-5EQ4D 60-69 years, male 13.6
GTEX-11TTK-2926-SM-5PNYP 60-69 years, female 13.0
GTEX-11GSP-3226-SM-5986O 60-69 years, female 12.9
GTEX-1445S-3026-SM-5O9BR 60-69 years, male 11.8
GTEX-13IVO-2926-SM-5L3CZ 70-79 years, male 11.0
GTEX-147GR-3026-SM-5S2ML 60-69 years, male 10.6
GTEX-11NV4-2126-SM-5N9DS 60-69 years, male 9.4
Show all
Brain - Frontal Cortex (BA9)
RPKM: 22.5
Samples: 108

Max RPKM: 44.2
Min RPKM: 7.5
Std RPKM: 6.0
Median RPKM: 23.2
GTEX-X4EP-0011-R10B-SM-4QASJ 60-69 years, female 44.2
GTEX-12ZZY-0011-R10b-SM-5HL7W 60-69 years, male 35.6
GTEX-13RTJ-0011-R10b-SM-5O9CW 60-69 years, male 31.9
GTEX-QMR6-0011-R10A-SM-32PKO 50-59 years, male 31.9
GTEX-QVUS-0011-R10A-SM-3GIK3 60-69 years, female 31.8
GTEX-T6MN-0011-R10A-SM-32QP7 50-59 years, male 31.3
GTEX-13SLX-0011-R10a-SM-5P9HV 50-59 years, female 30.6
GTEX-QDT8-0011-R10A-SM-32PKG 30-39 years, female 29.8
GTEX-P44H-0011-R10A-SM-2XCEK 40-49 years, male 29.7
GTEX-WVLH-0011-R10A-SM-3MJFM 50-59 years, male 29.7
GTEX-S7SE-0011-R10A-SM-2XCDF 50-59 years, male 29.3
GTEX-145MG-0011-R10a-SM-5PNWG 50-59 years, male 29.2
GTEX-13N2G-0011-R10a-SM-5MR34 60-69 years, male 29.1
GTEX-13O3O-0011-R10a-SM-5LUA9 60-69 years, female 28.4
GTEX-13OW7-0011-R10a-SM-5L3H3 50-59 years, male 28.4
GTEX-14ASI-0011-R10b-SM-5S2VZ 60-69 years, male 28.4
GTEX-WL46-0011-R10A-SM-3MJFQ 50-59 years, male 28.2
GTEX-WWYW-0011-R10A-SM-3NB35 50-59 years, female 28.2
GTEX-13NYS-0011-R10a-SM-5MR4S 60-69 years, male 27.8
GTEX-12WSF-0011-R10a-SM-5LZVH 70-79 years, male 27.7
GTEX-13QIC-0011-R10a-SM-5O9C7 60-69 years, female 27.7
GTEX-14BIN-0011-R10a-SM-5S2UA 50-59 years, female 27.4
GTEX-145MH-0011-R10b-SM-5PNUK 50-59 years, male 27.2
GTEX-12WSC-0011-R10a-SM-5GU57 50-59 years, male 26.9
GTEX-1313W-0011-R10b-SM-5DUXA 50-59 years, female 26.7
GTEX-13N1W-0011-R10b-SM-5MR4H 70-79 years, male 26.4
GTEX-QVJO-0011-R10A-SM-2S1QJ 60-69 years, female 26.4
GTEX-13FLW-0011-R10b-SM-5LZZF 50-59 years, male 26.3
GTEX-13CZV-0011-R10b-SM-5LZYD 60-69 years, male 26.1
GTEX-XLM4-0011-R10A-SM-4AT5P 60-69 years, male 26.0
GTEX-Y8DK-0011-R10A-SM-4SOK1 60-69 years, male 26.0
GTEX-13S7M-0011-R10b-SM-5PNZB 60-69 years, female 25.7
GTEX-132Q8-0011-R10b-SM-5DUWZ 60-69 years, male 25.5
GTEX-13NYB-0011-R10a-SM-5KM43 40-49 years, male 25.4
GTEX-12WSD-0011-R10b-SM-5GU79 60-69 years, female 25.3
GTEX-WZTO-0011-R10B-SM-4E3KB 40-49 years, male 25.3
GTEX-13X6J-0011-R10b-SM-5PNWA 50-59 years, male 25.2
GTEX-12ZZX-0011-R10b-SM-5DUWK 40-49 years, female 25.1
GTEX-X585-0011-R10A-SM-46MUY 50-59 years, male 25.0
GTEX-ZVZQ-0011-R10b-SM-51MRT 60-69 years, female 24.8
GTEX-12WSE-0011-R10b-SM-5P9JV 20-29 years, male 24.7
GTEX-13O3Q-0011-R10b-SM-5KM39 50-59 years, male 24.2
GTEX-YJ89-0011-R10a-SM-4SOK9 60-69 years, male 24.2
GTEX-147GR-0011-R10b-SM-5S2UM 60-69 years, male 23.9
GTEX-11H98-0011-R10b-SM-5NQ98 50-59 years, male 23.8
GTEX-13X6K-0011-R10a-SM-5P9JR 60-69 years, female 23.8
GTEX-N7MS-0011-R10A-SM-2HMJK 60-69 years, male 23.8
GTEX-ZUA1-0011-R10a-SM-51MT6 40-49 years, male 23.6
GTEX-X4XX-0011-R10B-SM-46MWO 60-69 years, male 23.5
GTEX-131YS-0011-R10b-SM-5EQ5N 60-69 years, female 23.4
GTEX-YFC4-0011-R10a-SM-4SOK5 40-49 years, female 23.4
GTEX-13FHO-0011-R10b-SM-5J2MM 60-69 years, male 23.3
GTEX-13FXS-0011-R10a-SM-5J2MA 50-59 years, male 23.3
GTEX-13X6I-0011-R10a-SM-5PNWI 60-69 years, male 23.3
GTEX-12WSH-0011-R10a-SM-5LZUS 50-59 years, male 23.1
GTEX-13OW6-0011-R10a-SM-5L3HE 50-59 years, male 23.1
GTEX-T5JC-0011-R10A-SM-32PM2 20-29 years, male 23.1
GTEX-13QJC-0011-R10a-SM-5SI63 60-69 years, female 22.8
GTEX-NPJ7-0011-R10A-SM-2I3E5 60-69 years, female 22.3
GTEX-12ZZZ-0011-R10a-SM-5P9HC 60-69 years, male 22.2
GTEX-RVPU-0011-R10A-SM-2XCAH 50-59 years, male 22.2
GTEX-ZAB4-0011-R10a-SM-4SOKH 40-49 years, male 22.2
GTEX-131XH-0011-R10a-SM-5EGLJ 50-59 years, male 22.1
GTEX-N7MT-0011-R10A-SM-2I3E1 60-69 years, female 22.1
GTEX-11ZUS-0011-R10b-SM-5BC79 30-39 years, male 22.0
GTEX-145LS-0011-R10a-SM-5PNUQ 60-69 years, female 21.6
GTEX-TSE9-0011-R10A-SM-3DB7O 60-69 years, female 21.6
GTEX-14BIL-0011-R10a-SM-5SI75 50-59 years, male 21.4
GTEX-ZDXO-0011-R10a-SM-4WWD8 60-69 years, male 21.2
GTEX-12126-0011-R10b-SM-5BC6T 20-29 years, male 20.7
GTEX-Z93S-0011-R10a-SM-4RGNM 50-59 years, male 20.7
GTEX-Q2AG-0011-R10A-SM-2HMLA 40-49 years, female 20.5
GTEX-NL3H-0011-R10A-SM-2I3E9 60-69 years, male 20.4
GTEX-13FTZ-0011-R10b-SM-5KLZS 60-69 years, male 20.3
GTEX-12WSM-0011-R10a-SM-5DUWV 60-69 years, male 20.2
GTEX-ZVT3-0011-R10b-SM-57WB6 60-69 years, female 20.1
GTEX-13OVL-0011-R10a-SM-5L3GS 50-59 years, male 19.9
GTEX-NPJ8-0011-R10A-SM-2YUMO 40-49 years, male 19.2
GTEX-11WQK-0011-R10a-SM-5BC6R 50-59 years, male 19.1
GTEX-145LU-0011-R10a-SM-5PNWJ 50-59 years, male 18.8
GTEX-ZF28-0011-R10a-SM-4WWEH 60-69 years, male 18.5
GTEX-147F4-0011-R10b-SM-5S2WC 50-59 years, male 18.4
GTEX-NL4W-0011-R10A-SM-2I3DY 50-59 years, male 18.2
GTEX-OXRN-0011-R10A-SM-2I5GC 50-59 years, male 17.6
GTEX-X261-0011-R10B-SM-4E3JT 50-59 years, male 17.6
GTEX-13OVJ-0011-R10b-SM-5L3HT 50-59 years, female 17.5
GTEX-13SLW-0011-R10a-SM-5S2UI 70-79 years, male 17.5
GTEX-139TS-0011-R10a-SM-5K7TU 60-69 years, male 17.4
GTEX-12WSA-0011-R10b-SM-5P9ET 60-69 years, male 17.2
GTEX-13G51-0011-R10b-SM-5LZYF 60-69 years, male 16.8
GTEX-13JUV-0011-R10b-SM-5LZXR 40-49 years, female 16.5
GTEX-13OW8-0011-R10a-SM-5L3H6 60-69 years, male 16.4
GTEX-XMD1-0011-R10A-SM-4AT4A 60-69 years, male 16.1
GTEX-11WQC-0011-R10a-SM-57WCT 60-69 years, male 15.7
GTEX-13FLV-0011-R10b-SM-5LZZ2 50-59 years, male 15.7
GTEX-12ZZW-0011-R10b-SM-5HL9X 50-59 years, male 14.9
GTEX-13NZA-0011-R10b-SM-5KM54 60-69 years, male 14.4
GTEX-11GSP-0011-R10a-SM-5NQ7J 60-69 years, female 13.6
GTEX-ZE7O-0011-R10a-SM-57WAZ 50-59 years, female 12.9
GTEX-OXRO-0011-R10A-SM-2I5EH 60-69 years, female 12.8
GTEX-1445S-0011-R10a-SM-5PNWB 60-69 years, male 12.5
GTEX-ZXG5-0011-R10a-SM-57WDD 60-69 years, male 11.8
GTEX-13JVG-0011-R10b-SM-5KM2P 60-69 years, male 11.5
GTEX-ZV68-0011-R10a-SM-51MT7 50-59 years, female 10.8
GTEX-131XW-0011-R10a-SM-5DUVA 50-59 years, female 10.4
GTEX-1477Z-0011-R10b-SM-5S2RF 60-69 years, male 9.9
GTEX-14753-0011-R10b-SM-5S2WE 60-69 years, male 9.3
GTEX-13IVO-0011-R10a-SM-5LZY3 70-79 years, male 7.5
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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