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VAMP3

ESOPHAGUS - Expression summary

RNA expression
HPA:90.0TPM
GTEx:34.3RPKM
FANTOM5:150.8Tags Per Million

ESOPHAGUS - Annotated protein expression

Pending normal tissue analysis

ESOPHAGUS - HPA RNA-seq

Average TPM

90.0
overview Female, age 70 Sample 1
TPM: 80.4
Cell types%
Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45
overview Male, age 38 Sample 2
TPM: 103.2
Cell types%
Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20
overview Male, age 76 Sample 3
TPM: 86.6
Cell types%
Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM

34.3

GTEx sample id

Sample description

RPKM
Esophagus - Mucosa
RPKM: 34.3
Samples: 286

Max RPKM: 50.4
Min RPKM: 19.6
Std RPKM: 5.2
Median RPKM: 34.5
GTEX-1399U-1026-SM-5J1OC 50-59 years, female 50.4
GTEX-WRHK-0526-SM-4MVOF 20-29 years, female 49.1
GTEX-13CF3-1626-SM-5IFG9 60-69 years, female 48.0
GTEX-OIZI-1426-SM-3NB1T 40-49 years, male 47.8
GTEX-ZXES-1126-SM-5GZXN 30-39 years, female 47.7
GTEX-WEY5-0926-SM-4LMI4 40-49 years, female 47.3
GTEX-13111-0826-SM-5LZV3 50-59 years, male 47.1
GTEX-T5JW-1326-SM-4DM5G 20-29 years, female 46.4
GTEX-QEG5-1426-SM-447AS 20-29 years, male 46.3
GTEX-XLM4-2326-SM-4TT2D 60-69 years, male 46.1
Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million

150.8

FANTOM5 sample id

Sample description

Tags Per Million
Esophagus
Tags Per Million: 150.8
FF:10015-101C6 68,74,75 years, mixed 150.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.