Tissue expression of LIMA1 - Staining in breast

BREAST - Expression summary

Protein expression

RNA expression

HPA:	84.1	TPM
GTEx:	45.2	RPKM
FANTOM5:	60.6	Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:	Not detected
Glandular cells:	High
Myoepithelial cells:	Low

Antibody staining	Antibody HPA023871	Antibody HPA052645
Adipocytes	Not detected	Not detected
Glandular cells	Medium	High
Myoepithelial cells	Medium	Low

BREAST - HPA RNA-seq

Average TPM	84.1

Female, age 52

Sample 1
TPM: 52.2

Cell types%

Glandular cells: 15
Adipocytes: 5
Other cell types: 80

Female, age 80

Sample 2
TPM: 125.2

Cell types%

Glandular cells: 5
Adipocytes: 15
Other cell types: 80

Female, age 47

Sample 3
TPM: 110.3

Cell types%

Glandular cells: 5
Adipocytes: 5
Other cell types: 90

Female, age 38

Sample 4
TPM: 48.8

Cell types%

Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM	45.2

GTEx sample id

Sample description

RPKM

Breast - Mammary Tissue
RPKM: 45.2

Samples: 214

Max RPKM: 109.3
Min RPKM: 11.9
Std RPKM: 16.7
Median RPKM: 41.5

GTEX-117XS-1926-SM-5GICO

60-69 years, male

109.3

GTEX-TKQ2-1826-SM-33HB2

50-59 years, male

102.0

GTEX-11ONC-2126-SM-5HL6E

60-69 years, male

94.7

GTEX-ZYFC-0826-SM-5E44K

50-59 years, male

93.9

GTEX-XMK1-1126-SM-4IHJ8

40-49 years, male

85.6

GTEX-144GL-2026-SM-5LU3O

50-59 years, male

85.4

GTEX-11DXZ-1926-SM-5GZZL

50-59 years, male

82.8

GTEX-TKQ1-0226-SM-33HB5

30-39 years, male

80.2

GTEX-R53T-1526-SM-48FEK

50-59 years, female

79.8

GTEX-132NY-0826-SM-5K7Y7

60-69 years, male

78.8

Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million	60.6

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 60.6

FF:10080-102A8

77 years, female

60.6