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LIMA1

SMALL INTESTINE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:137.6TPM
GTEx:31.6RPKM
FANTOM5:362.1Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:High
 

Antibody staining

Antibody HPA023871

  

Antibody HPA052645

  

Glandular cells

 High   High  
   
   
   

SMALL INTESTINE - HPA RNA-seq

Average TPM

137.6
overview Male, age 65 Sample 1
TPM: 107.3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39 Sample 2
TPM: 174.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68 Sample 3
TPM: 115.7
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85 Sample 4
TPM: 153.5

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

31.6

GTEx sample id

Sample description

RPKM
Small Intestine - Terminal Ileum
RPKM: 31.6
Samples: 88

Max RPKM: 57.5
Min RPKM: 10.3
Std RPKM: 10.0
Median RPKM: 31.0
GTEX-XGQ4-1326-SM-4GIDU 50-59 years, male 57.5
GTEX-ZXES-1526-SM-5NQ95 30-39 years, female 55.2
GTEX-YB5E-1526-SM-5IFIE 40-49 years, male 50.7
GTEX-11DXZ-1326-SM-5H11X 50-59 years, male 49.7
GTEX-139YR-2226-SM-5IFFW 50-59 years, male 45.9
GTEX-ZYFG-2026-SM-5E43Y 60-69 years, female 45.8
GTEX-145LT-1026-SM-5LU9O 40-49 years, male 45.3
GTEX-XXEK-1026-SM-4BRUW 50-59 years, male 44.9
GTEX-13FTW-2026-SM-5IJE2 40-49 years, male 44.8
GTEX-133LE-1426-SM-5IFH1 20-29 years, female 44.4
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

362.1

FANTOM5 sample id

Sample description

Tags Per Million
Small intestine
Tags Per Million: 362.1
FF:10024-101D6 15,40,85 years, mixed 362.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.