Fields »
ABOUT
HELP
BLOG
ATG5

SMALL INTESTINE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:22.4TPM
GTEx:8.9RPKM
FANTOM5:67.3Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:Medium
 

Antibody staining

Antibody HPA042973

  

Antibody CAB034432

  

Antibody CAB037309

  

Glandular cells

 High   Medium   High  
     
     
     

SMALL INTESTINE - HPA RNA-seq

Average TPM

22.4
overview Male, age 65 Sample 1
TPM: 21.3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39 Sample 2
TPM: 23.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68 Sample 3
TPM: 20.6
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85 Sample 4
TPM: 23.8

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

8.9

GTEx sample id

Sample description

RPKM
Small Intestine - Terminal Ileum
RPKM: 8.9
Samples: 88

Max RPKM: 12.8
Min RPKM: 6.2
Std RPKM: 1.1
Median RPKM: 8.9
GTEX-139YR-2226-SM-5IFFW 50-59 years, male 12.8
GTEX-XGQ4-1326-SM-4GIDU 50-59 years, male 11.6
GTEX-145LT-1026-SM-5LU9O 40-49 years, male 11.0
GTEX-1399R-2026-SM-5K7WN 30-39 years, male 10.9
GTEX-ZYWO-1526-SM-5SIAL 40-49 years, female 10.8
GTEX-YB5E-1526-SM-5IFIE 40-49 years, male 10.7
GTEX-ZPCL-1726-SM-57WEO 60-69 years, female 10.7
GTEX-ZZ64-0526-SM-5GZXM 20-29 years, male 10.3
GTEX-131XF-1326-SM-5GCMQ 60-69 years, male 10.0
GTEX-11EQ9-1326-SM-5985X 30-39 years, male 9.9
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

67.3

FANTOM5 sample id

Sample description

Tags Per Million
Small intestine
Tags Per Million: 67.3
FF:10024-101D6 15,40,85 years, mixed 67.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.