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SNRNP40

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:20.2TPM
GTEx:6.0RPKM
FANTOM5:34.7Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Fibroblasts:Medium
Peripheral nerve:Medium
Adipocytes:Medium
Chondrocytes:Medium
 

Antibody staining

Antibody HPA026527

  

Antibody HPA027345

  

Fibroblasts

 Medium   Medium  

Peripheral nerve

 Medium   Medium  

Adipocytes

 Medium  

Chondrocytes

 Medium  
   
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Fibroblasts:Medium
Peripheral nerve:Medium
 
 
 

Antibody staining

Antibody HPA026527

  

Antibody HPA027345

  

Adipocytes

 Medium   Medium  

Fibroblasts

 Medium   Low  

Peripheral nerve

 Medium  
      
      
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

20.2
N/A Female, age 80 Sample 1
TPM: 21.7
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 11.6
N/A Female, age 57 Sample 3
TPM: 12.9
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 34.4
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 20.7
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

6.0

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 6.2
Samples: 350

Max RPKM: 10.6
Min RPKM: 3.6
Std RPKM: 1.0
Median RPKM: 6.1
GTEX-REY6-0326-SM-2TF5A 60-69 years, male 10.6
GTEX-QEG5-0326-SM-2S1PB 20-29 years, male 10.4
GTEX-QESD-1526-SM-2S1QT 20-29 years, male 10.3
GTEX-11EMC-2826-SM-5PNY6 60-69 years, female 9.6
GTEX-Y3IK-2526-SM-4WWDM 50-59 years, female 9.0
GTEX-ZYVF-0226-SM-5GIEG 50-59 years, female 9.0
GTEX-XXEK-2426-SM-4BRUS 50-59 years, male 8.7
GTEX-QEL4-0326-SM-3GAE5 50-59 years, male 8.6
GTEX-13RTJ-2526-SM-5S2Q3 60-69 years, male 8.5
GTEX-144GM-1926-SM-5LUAN 20-29 years, male 8.5
Show all
Adipose - Visceral (Omentum)
RPKM: 5.7
Samples: 227

Max RPKM: 10.6
Min RPKM: 3.3
Std RPKM: 1.1
Median RPKM: 5.5
GTEX-11WQK-1526-SM-5EGKN 50-59 years, male 10.6
GTEX-ZYVF-1026-SM-5E44V 50-59 years, female 10.2
GTEX-Y5LM-0826-SM-4VDSW 40-49 years, female 9.6
GTEX-13PVQ-2226-SM-5L3G9 50-59 years, male 9.5
GTEX-13X6H-1726-SM-5Q5EH 50-59 years, female 8.7
GTEX-133LE-0926-SM-5P9J1 20-29 years, female 8.5
GTEX-1128S-0926-SM-5GZZU 60-69 years, female 8.3
GTEX-13QBU-1326-SM-5LU4K 40-49 years, female 8.1
GTEX-ZZPU-0326-SM-5N9BJ 50-59 years, female 8.1
GTEX-13IVO-2426-SM-5K7V9 70-79 years, male 8.0
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

34.7

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 34.7
FF:10010-101C1 65,65,76 years, mixed 34.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.