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ACAA1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:54.9TPM
GTEx:23.0RPKM
FANTOM5:66.8Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Low
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA006764

  

Antibody HPA007244

  

Endothelial cells

 Not detected   Not detected  

Glandular cells

 Low   Low  

Peripheral nerve/ganglion

 Not detected   Not detected  
   

COLON - HPA RNA-seq

Average TPM

54.9
overview Male, age 54 Sample 1
TPM: 47.7
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 54.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 54.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 89.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 43
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 34.7
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 56.2
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 61.2
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 32.5
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 65.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 72.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 54
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 48.3
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

23.0

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 14.4
Samples: 149

Max RPKM: 22.6
Min RPKM: 8.9
Std RPKM: 2.4
Median RPKM: 14.2
GTEX-V955-1726-SM-4JBHF 60-69 years, male 22.6
GTEX-YEC3-2026-SM-4WWFL 50-59 years, male 21.9
GTEX-Y5LM-1426-SM-5RQJL 40-49 years, female 20.4
GTEX-ZAJG-2626-SM-5S2NU 50-59 years, female 20.1
GTEX-139TS-2226-SM-5J2N1 60-69 years, male 19.7
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 19.7
GTEX-1477Z-2126-SM-5Q5CM 60-69 years, male 19.0
GTEX-13PL7-2426-SM-5J2N3 60-69 years, female 18.8
GTEX-XV7Q-2226-SM-4BRVY 40-49 years, female 18.8
GTEX-14A5I-2426-SM-5Q5CP 50-59 years, female 18.4
Show all
Colon - Transverse
RPKM: 29.5
Samples: 196

Max RPKM: 103.1
Min RPKM: 8.8
Std RPKM: 13.7
Median RPKM: 29.9
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 103.1
GTEX-ZF2S-1926-SM-4WWAN 50-59 years, female 60.2
GTEX-14E6E-1526-SM-5RQIG 30-39 years, male 55.8
GTEX-PLZ5-1126-SM-3P613 50-59 years, male 55.0
GTEX-ZYWO-1626-SM-5E44H 40-49 years, female 54.7
GTEX-131XG-1826-SM-5LZV4 50-59 years, female 53.7
GTEX-11DXZ-1726-SM-5H12M 50-59 years, male 53.3
GTEX-P4QT-1426-SM-3NMCX 50-59 years, female 53.2
GTEX-WOFM-2026-SM-4OOSQ 20-29 years, male 53.1
GTEX-Q2AH-1226-SM-48TZL 40-49 years, male 52.4
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

66.8

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 66.8
FF:10014-101C5 62,83,84 years, mixed 66.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.