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U2AF2

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:67.6TPM
GTEx:45.5RPKM
FANTOM5:148.6Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:High
Peripheral nerve/ganglion:Medium
 
 

Antibody staining

Antibody HPA043562

  

Antibody CAB010910

  

Endothelial cells

 Medium   High  

Glandular cells

 High   High  

Peripheral nerve/ganglion

 Medium  
      
   
   
   

COLON - HPA RNA-seq

Average TPM

67.6
overview Male, age 54 Sample 1
TPM: 73.8
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 66
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 65.4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 66.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 49.7
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 66.7
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 53
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 68.8
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 63.6
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 82.3
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 81
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 83.3
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 59.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

45.5

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 43.1
Samples: 149

Max RPKM: 74.9
Min RPKM: 24.3
Std RPKM: 8.8
Median RPKM: 41.7
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 74.9
GTEX-ZAJG-2626-SM-5S2NU 50-59 years, female 71.3
GTEX-139D8-2926-SM-5IJBM 30-39 years, female 65.1
GTEX-131XE-1026-SM-5EGKE 50-59 years, male 65.0
GTEX-XUW1-1826-SM-4BOQD 50-59 years, female 62.8
GTEX-12WSL-1826-SM-5LZW9 50-59 years, male 62.4
GTEX-WQUQ-2626-SM-4MVNP 60-69 years, male 62.3
GTEX-V955-1726-SM-4JBHF 60-69 years, male 61.0
GTEX-13OW5-2826-SM-5KM1G 60-69 years, male 60.6
GTEX-ZVT4-2626-SM-5N9GJ 50-59 years, female 59.2
Show all
Colon - Transverse
RPKM: 47.3
Samples: 196

Max RPKM: 82.4
Min RPKM: 20.4
Std RPKM: 9.3
Median RPKM: 46.6
GTEX-13S86-1626-SM-5Q5C5 40-49 years, male 82.4
GTEX-R53T-1326-SM-48FCQ 50-59 years, female 75.0
GTEX-Q734-1126-SM-48TZY 40-49 years, female 74.3
GTEX-QEL4-1926-SM-4R1JI 50-59 years, male 69.4
GTEX-146FQ-1926-SM-5NQBY 30-39 years, male 67.9
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 67.6
GTEX-PWOO-1326-SM-48TCJ 40-49 years, female 66.6
GTEX-131XE-0826-SM-5HL9W 50-59 years, male 66.5
GTEX-XV7Q-2126-SM-4BRVX 40-49 years, female 66.1
GTEX-139TS-1926-SM-5IJFO 60-69 years, male 65.5
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

148.6

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 148.6
FF:10014-101C5 62,83,84 years, mixed 148.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.