Fields »
ABOUT
HELP
BLOG
TNPO3

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:18.5TPM
GTEx:10.2RPKM
FANTOM5:34.6Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
 

Antibody staining

Antibody HPA039555

  

Endothelial cells

 Medium  

Glandular cells

 Medium  
 

COLON - HPA RNA-seq

Average TPM

18.5
overview Male, age 54 Sample 1
TPM: 18.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 16.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 16.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 17.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 11.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 17.7
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 22.3
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 19.3
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 20.8
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 21.3
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 22.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 21.2
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 15
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

10.2

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 10.2
Samples: 149

Max RPKM: 16.8
Min RPKM: 3.8
Std RPKM: 2.6
Median RPKM: 10.1
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 16.8
GTEX-131XG-1526-SM-5GCNQ 50-59 years, female 16.5
GTEX-14E6E-1726-SM-5S2R6 30-39 years, male 15.7
GTEX-XV7Q-2226-SM-4BRVY 40-49 years, female 15.5
GTEX-WYVS-1126-SM-4SOJX 40-49 years, female 15.3
GTEX-ZAB5-1426-SM-5HL9D 50-59 years, male 15.1
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 15.0
GTEX-1399R-2126-SM-5K7WZ 30-39 years, male 14.6
GTEX-11P81-1426-SM-5P9JN 30-39 years, female 14.5
GTEX-131XE-1026-SM-5EGKE 50-59 years, male 14.5
Show all
Colon - Transverse
RPKM: 10.3
Samples: 196

Max RPKM: 16.6
Min RPKM: 6.4
Std RPKM: 1.8
Median RPKM: 10.1
GTEX-R53T-1326-SM-48FCQ 50-59 years, female 16.6
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 15.5
GTEX-XXEK-1926-SM-4BRVD 50-59 years, male 15.4
GTEX-11P81-1126-SM-5GU5G 30-39 years, female 14.6
GTEX-XAJ8-0426-SM-47JYJ 40-49 years, male 14.4
GTEX-U3ZH-1326-SM-4DXSF 30-39 years, male 14.3
GTEX-144GN-1126-SM-5LU33 50-59 years, male 14.1
GTEX-ZV6S-1226-SM-59HLH 40-49 years, female 14.0
GTEX-T6MO-0826-SM-4DM51 40-49 years, female 13.7
GTEX-12WSL-1626-SM-5GCMU 50-59 years, male 13.6
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

34.6

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 34.6
FF:10014-101C5 62,83,84 years, mixed 34.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.