We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • HUMAN PATHOLOGY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
CTSA
  • premium

    TISSUE

  • premium

    CELL

  • PATHOLOGY

TISSUE ATLAS PRIMARY DATA HIPPOCAMPUS

GENE/PROTEIN

Antibody validation


Dictionary

Hippocampus

HIPPOCAMPUS - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:18.8RPKM
FANTOM5:64.7Tags Per Million

HIPPOCAMPUS - Annotated protein expression

Annotated protein
expression

Glial cells:Low
Neuronal cells:Medium
 

Antibody staining

Antibody HPA031068

 

Antibody CAB024930

 

Glial cells

Low   Low  

Neuronal cells

Medium   Medium  
   
   
   

HIPPOCAMPUS - HPA RNA-seq

Pending HPA RNA-seq analysis


HIPPOCAMPUS - GTEx RNA-seq

Average RPKM

18.8

GTEx sample id

Sample description

RPKM

Brain - Hippocampus
RPKM: 18.8
Samples: 94

Max RPKM: 40.5
Min RPKM: 5.2
Std RPKM: 6.9
Median RPKM: 19.6
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 40.5
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 34.8
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 33.1
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 29.5
GTEX-13G51-0011-R1a-SM-5LZYR 60-69 years, male 29.3
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 27.9
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 27.7
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 27.6
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 27.1
GTEX-RNOR-0011-R1A-SM-5SI8F 50-59 years, female 26.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 26.6
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 26.5
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 26.3
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 26.3
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 25.3
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 25.2
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 24.9
GTEX-XOTO-0011-R1B-SM-4B65C 50-59 years, male 24.8
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 24.6
GTEX-QVJO-0011-R1A-SM-2S1QI 60-69 years, female 24.6
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 24.3
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 24.2
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 24.0
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 23.4
GTEX-13OW6-0011-R1a-SM-5L3HQ 50-59 years, male 23.4
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 23.4
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 23.3
GTEX-13N2G-0011-R1b-SM-5MR3G 60-69 years, male 22.7
GTEX-N7MT-0011-R1a-SM-5SI7S 60-69 years, female 22.7
GTEX-ZAB4-0011-R1a-SM-4RGNO 40-49 years, male 22.5
GTEX-13X6I-0011-R1b-SM-5PNZC 60-69 years, male 22.3
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 21.9
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 21.6
GTEX-145LS-0011-R1b-SM-5PNUP 60-69 years, female 21.5
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 21.5
GTEX-131YS-0011-R1a-SM-5DUXC 60-69 years, female 21.0
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 21.0
GTEX-11ONC-0011-R1a-SM-57WD4 60-69 years, male 20.9
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 20.9
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 20.9
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 20.5
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 20.4
GTEX-ZUA1-0011-R1a-SM-4YCE2 40-49 years, male 20.3
GTEX-NPJ7-0011-R1a-SM-3GACT 60-69 years, female 20.1
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 20.0
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 20.0
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 19.7
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 19.4
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 19.3
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 19.0
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 18.3
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 18.3
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 18.3
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 17.5
GTEX-S7SE-0011-R1A-SM-2XCDE 50-59 years, male 17.4
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 17.3
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 17.1
GTEX-14ASI-0011-R1b-SM-5S2TY 60-69 years, male 17.0
GTEX-11GSO-0011-R1b-SM-57WD3 60-69 years, male 16.9
GTEX-12WSD-0011-R1b-SM-5LZVY 60-69 years, female 16.8
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 16.2
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 15.7
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 15.4
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 15.3
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 14.7
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 14.6
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 14.4
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 14.3
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 14.1
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 14.0
GTEX-1212Z-0011-R1b-SM-5BC72 60-69 years, male 13.8
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 13.1
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 13.0
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 12.9
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 12.6
GTEX-12WSB-0011-R1b-SM-5P9EY 60-69 years, female 12.1
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 12.0
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 11.8
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 11.5
GTEX-YJ89-0011-R1a-SM-4RGLS 60-69 years, male 11.0
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 10.8
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 10.6
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 10.4
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 10.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 10.2
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 9.4
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 7.8
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 7.7
GTEX-ZVZQ-0011-R1a-SM-57WBU 60-69 years, female 7.4
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 7.1
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 5.9
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 5.7
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 5.6
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 5.2
Show all

HIPPOCAMPUS - FANTOM5 CAGE

Average Tags Per Million

64.7

FANTOM5 sample id

Sample description

Tags Per Million

Hippocampus
Tags Per Million: 62.7
FF:10153-102I9 76 years, female 71.6
FF:10169-103B7 60 years, female 53.9

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.