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ABCA7

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:5.0TPM
GTEx:3.4RPKM
FANTOM5:9.4Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Low
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA041564

  

Endothelial cells

 Not detected  

Glandular cells

 Low  

Peripheral nerve/ganglion

 Not detected  
 
 
 

COLON - HPA RNA-seq

Average TPM

5.0
overview Male, age 54 Sample 1
TPM: 5.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 8.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 12.9
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 7.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 7
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 1.2
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 2.2
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 3.7
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 2.6
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 3.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 3.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 3.8
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 4.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

3.4

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 1.7
Samples: 149

Max RPKM: 6.3
Min RPKM: 0.3
Std RPKM: 1.0
Median RPKM: 1.4
GTEX-WQUQ-2626-SM-4MVNP 60-69 years, male 6.3
GTEX-13X6K-2726-SM-5O9DG 60-69 years, female 5.7
GTEX-146FH-2426-SM-5Q5EW 50-59 years, female 4.8
GTEX-YJ8A-1726-SM-5P9IQ 20-29 years, male 4.8
GTEX-YEC3-2026-SM-4WWFL 50-59 years, male 4.5
GTEX-V955-1726-SM-4JBHF 60-69 years, male 4.3
GTEX-139D8-2926-SM-5IJBM 30-39 years, female 4.2
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 3.7
GTEX-XV7Q-2226-SM-4BRVY 40-49 years, female 3.5
GTEX-ZC5H-2426-SM-4WAZ6 40-49 years, female 3.5
Show all
Colon - Transverse
RPKM: 4.6
Samples: 196

Max RPKM: 12.4
Min RPKM: 0.5
Std RPKM: 2.7
Median RPKM: 4.2
GTEX-R53T-1326-SM-48FCQ 50-59 years, female 12.4
GTEX-14C38-2626-SM-5RQI4 50-59 years, male 12.1
GTEX-XV7Q-2126-SM-4BRVX 40-49 years, female 11.9
GTEX-WHWD-1226-SM-4OOS1 50-59 years, male 11.5
GTEX-ZYWO-1626-SM-5E44H 40-49 years, female 11.2
GTEX-131XE-0826-SM-5HL9W 50-59 years, male 11.1
GTEX-UJHI-1126-SM-4IHLN 50-59 years, female 11.0
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 10.6
GTEX-144GN-1126-SM-5LU33 50-59 years, male 10.5
GTEX-Q734-1126-SM-48TZY 40-49 years, female 10.5
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

9.4

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 9.4
FF:10014-101C5 62,83,84 years, mixed 9.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.